RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 ABCA3Q99758 1704 aa10.02□□□□□ -0.81
SNRNP200-201ENST00000323853 A0A087WUU8 490 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 PRRT4C9JH25 899 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 TOR1AO14656 332 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 SBK2P0C263 348 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 TGFBR1P36897 503 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 SRPXP78539 464 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 EMC4Q5J8M3 183 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 ARL5BQ96KC2 179 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 CMC2Q9NRP2 79 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 SERTAD4Q9NUC0 356 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 ATPIF1Q9UII2 106 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 SSX4O60224 188 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 OXA1LQ15070 435 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 KCNIP4Q6PIL6 250 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 BBS1Q8NFJ9 593 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 UPRTQ96BW1 309 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 WASH6PQ9NQA3 447 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 MYH14Q7Z406 1995 aaKnown RBP10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 ZNF814B7Z6K7 855 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 G3V3Y1 287 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 RFXAPO00287 272 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 OR7C1O76099 320 aaPredicted RBP10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 MSL3P1P0C860 447 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 HIST1H1CP16403 213 aaKnown RBP10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 RACK1P63244 317 aaKnown RBP10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 FJX1Q86VR8 437 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 OR1J2Q8NGS2 313 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 GOT1L1Q8NHS2 421 aaPredicted RBP10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 RBPMSQ93062 196 aaKnown RBP10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 CALHM2Q9HA72 323 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 NPFFR2Q9Y5X5 522 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 C2orf72A6NCS6 295 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 MAP2K6P52564 334 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 RNF141Q8WVD5 230 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 OPALINQ96PE5 141 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 SIT1Q9Y3P8 196 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 TMEM200CA6NKL6 621 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 PLRG1O43660 514 aaKnown RBP10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 B4GALT3O60512 393 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 SULT1C4O75897 302 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 M6PRP20645 277 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 NME2P22392 152 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 HOXA1P49639 335 aaPredicted RBP10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 BDH1Q02338 343 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 CATR1Q13166 79 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 OR5M1Q8NGP8 315 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 BAHD1Q8TBE0 780 aaPredicted RBP10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 PCNPQ8WW12 178 aaKnown RBP10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 Q96M85 177 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 CTRCQ99895 268 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 PDCD1LG2Q9BQ51 273 aa10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 C6orf106Q9H6K1 298 aaPredicted RBP10.01□□□□□ -0.81
SNRNP200-201ENST00000323853 GABARAPH6UMI1 98 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 TIMM8AO60220 97 aaPredicted RBP10□□□□□ -0.81
SNRNP200-201ENST00000323853 FGF17O60258 216 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 IL32P24001 234 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 TLE4Q04727 773 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 ACSM1Q08AH1 577 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 EXT1Q16394 746 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 SLC37A2Q8TED4 501 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 SCARB1Q8WTV0 552 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 PIGTQ969N2 578 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 GCM1Q9NP62 436 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 FGF21Q9NSA1 209 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 ZNF705FA8MVS1 300 aaPredicted RBP10□□□□□ -0.81
SNRNP200-201ENST00000323853 HSD17B6O14756 317 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 FZD6O60353 706 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 AKR7A3O95154 331 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 ZNF705DP0CH99 300 aaPredicted RBP10□□□□□ -0.81
SNRNP200-201ENST00000323853 ZNF705BP0CI00 300 aaPredicted RBP10□□□□□ -0.81
SNRNP200-201ENST00000323853 SPI1P17947 270 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 CPT2P23786 658 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 SDHAP31040 664 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 RNLSQ5VYX0 342 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 SLC51BQ86UW2 128 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 GRAMD2AQ8IUY3 354 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 C19orf43Q9BQ61 176 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 TCEAL7Q9BRU2 100 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 TWSG1Q9GZX9 223 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 CDCP1Q9H5V8 836 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 CGGBP1Q9UFW8 167 aaPredicted RBP10□□□□□ -0.81
SNRNP200-201ENST00000323853 A0A0A6YYJ9 748 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 ETHE1O95571 254 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 EN2P19622 333 aaPredicted RBP10□□□□□ -0.81
SNRNP200-201ENST00000323853 TGM4P49221 684 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 WDR5BQ86VZ2 330 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 LINC01599Q8WXQ3 324 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 DCLRE1CQ96SD1 692 aaKnown RBP10□□□□□ -0.81
SNRNP200-201ENST00000323853 LAT2Q9GZY6 243 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 ZNF385DQ9H6B1 395 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 PRMT8Q9NR22 394 aaPredicted RBP10□□□□□ -0.81
SNRNP200-201ENST00000323853 H0Y8X5 98 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 I6L893 689 aaPredicted RBP10□□□□□ -0.81
SNRNP200-201ENST00000323853 EIF4EP06730 217 aaKnown RBP10□□□□□ -0.81
SNRNP200-201ENST00000323853 EMDP50402 254 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 ELAVL1Q15717 326 aaKnown RBP10□□□□□ -0.81
SNRNP200-201ENST00000323853 DMBX1Q8NFW5 382 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 OR51S1Q8NGJ8 323 aa10□□□□□ -0.81
SNRNP200-201ENST00000323853 SECTM1Q8WVN6 248 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms