RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 NEURL1O76050 574 aa6.4□□□□□ -1.38
NPHP1-201ENST00000316534 MRPL3P09001 348 aaKnown RBP6.4□□□□□ -1.38
NPHP1-201ENST00000316534 CD8BP10966 210 aa6.4□□□□□ -1.38
NPHP1-201ENST00000316534 NPR2P20594 1047 aa6.4□□□□□ -1.38
NPHP1-201ENST00000316534 CCL1P22362 96 aa6.4□□□□□ -1.38
NPHP1-201ENST00000316534 C19orf57Q0VDD7 668 aa6.4□□□□□ -1.38
NPHP1-201ENST00000316534 C1QTNF12Q5T7M4 302 aa6.4□□□□□ -1.38
NPHP1-201ENST00000316534 ZNF679Q8IYX0 411 aa6.4□□□□□ -1.38
NPHP1-201ENST00000316534 DCBLD2Q96PD2 775 aa6.4□□□□□ -1.38
NPHP1-201ENST00000316534 AMELYQ99218 206 aa6.4□□□□□ -1.38
NPHP1-201ENST00000316534 PRRX2Q99811 253 aa6.4□□□□□ -1.38
NPHP1-201ENST00000316534 PLEKHA1Q9HB21 404 aa6.4□□□□□ -1.38
NPHP1-201ENST00000316534 ASCL3Q9NQ33 180 aa6.4□□□□□ -1.38
NPHP1-201ENST00000316534 G6PC2Q9NQR9 355 aa6.4□□□□□ -1.38
NPHP1-201ENST00000316534 SACM1LQ9NTJ5 587 aa6.4□□□□□ -1.38
NPHP1-201ENST00000316534 PCDHGA9Q9Y5G4 932 aaKnown RBP6.4□□□□□ -1.38
NPHP1-201ENST00000316534 WDR87Q6ZQQ6 2873 aa6.4□□□□□ -1.39
NPHP1-201ENST00000316534 IGKV1D-43A0A0B4J1Z2 117 aa6.4□□□□□ -1.39
NPHP1-201ENST00000316534 ACOD1A6NK06 481 aa6.4□□□□□ -1.39
NPHP1-201ENST00000316534 TMEM212A6NML5 194 aa6.4□□□□□ -1.39
NPHP1-201ENST00000316534 GPR171O14626 319 aa6.4□□□□□ -1.39
NPHP1-201ENST00000316534 VAMP5O95183 116 aa6.4□□□□□ -1.39
NPHP1-201ENST00000316534 ITPKBP27987 946 aa6.4□□□□□ -1.39
NPHP1-201ENST00000316534 PYCR1P32322 319 aa6.4□□□□□ -1.39
NPHP1-201ENST00000316534 CCR4P51679 360 aa6.4□□□□□ -1.39
NPHP1-201ENST00000316534 INPP5JQ15735 1006 aaPredicted RBP6.4□□□□□ -1.39
NPHP1-201ENST00000316534 TP53I3Q53FA7 332 aa6.4□□□□□ -1.39
NPHP1-201ENST00000316534 ACSM3Q53FZ2 586 aa6.4□□□□□ -1.39
NPHP1-201ENST00000316534 TMPRSS12Q86WS5 348 aa6.4□□□□□ -1.39
NPHP1-201ENST00000316534 ZFP41Q8N8Y5 198 aa6.4□□□□□ -1.39
NPHP1-201ENST00000316534 ZIC4Q8N9L1 334 aa6.4□□□□□ -1.39
NPHP1-201ENST00000316534 TMEM45BQ96B21 275 aa6.4□□□□□ -1.39
NPHP1-201ENST00000316534 INTS12Q96CB8 462 aaKnown RBP6.4□□□□□ -1.39
NPHP1-201ENST00000316534 NXPE2Q96DL1 559 aa6.4□□□□□ -1.39
NPHP1-201ENST00000316534 TSSK2Q96PF2 358 aa6.4□□□□□ -1.39
NPHP1-201ENST00000316534 TMED9Q9BVK6 235 aa6.4□□□□□ -1.39
NPHP1-201ENST00000316534 SYT4Q9H2B2 425 aa6.4□□□□□ -1.39
NPHP1-201ENST00000316534 METTL7AQ9H8H3 244 aa6.4□□□□□ -1.39
NPHP1-201ENST00000316534 SNTG1Q9NSN8 517 aa6.4□□□□□ -1.39
NPHP1-201ENST00000316534 DDX28Q9NUL7 540 aaKnown RBP6.4□□□□□ -1.39
NPHP1-201ENST00000316534 KLRF1Q9NZS2 232 aa6.4□□□□□ -1.39
NPHP1-201ENST00000316534 PHF3Q92576 2039 aaKnown RBP6.4□□□□□ -1.39
NPHP1-201ENST00000316534 KIF26BQ2KJY2 2108 aa6.4□□□□□ -1.39
NPHP1-201ENST00000316534 IGKV3D-15A0A087WSY6 115 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 J3QLW9 94 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 ZFPL1O95159 310 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 EPXP11678 715 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 ZNF19P17023 458 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 RBMS1P29558 406 aaKnown RBP6.39□□□□□ -1.39
NPHP1-201ENST00000316534 CD96P40200 585 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 NR4A2P43354 598 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 RASGEF1BQ0VAM2 473 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 SFXN4Q6P4A7 337 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 NCCRP1Q6ZVX7 275 aaPredicted RBP6.39□□□□□ -1.39
NPHP1-201ENST00000316534 SLC35D2Q76EJ3 337 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 ZNF627Q7L945 461 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 PRSS45Q7RTY3 260 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 FAM83FQ8NEG4 500 aaPredicted RBP6.39□□□□□ -1.39
NPHP1-201ENST00000316534 OR2G2Q8NGZ5 317 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 OR52N5Q8NH56 324 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 GPR148Q8TDV2 347 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 SSC4DQ8WTU2 575 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 SMAP2Q8WU79 429 aaPredicted RBP6.39□□□□□ -1.39
NPHP1-201ENST00000316534 NKD1Q969G9 470 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 NABP1Q96AH0 204 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 HDHD5Q9BXW7 423 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 PTGES2Q9H7Z7 377 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 ABCB9Q9NP78 766 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 ING1Q9UK53 422 aaPredicted RBP6.39□□□□□ -1.39
NPHP1-201ENST00000316534 GRIP1Q9Y3R0 1128 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 NOTOA8MTQ0 251 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 EIF1BO60739 113 aaKnown RBP6.39□□□□□ -1.39
NPHP1-201ENST00000316534 DPP4P27487 766 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 RFX2P48378 723 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 CBX3Q13185 183 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 NRN1LQ496H8 165 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 DDI2Q5TDH0 399 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 DNM1P34Q6PK57 102 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 RPTNQ6XPR3 784 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 LRRC28Q86X40 367 aaPredicted RBP6.39□□□□□ -1.39
NPHP1-201ENST00000316534 ZNF511Q8NB15 262 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 OR10S1Q8NGN2 331 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 TRIM63Q969Q1 353 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 SLC25A44Q96H78 314 aaPredicted RBP6.39□□□□□ -1.39
NPHP1-201ENST00000316534 WACQ9BTA9 647 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 DEPPQ9NTK1 212 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 P4HTMQ9NXG6 502 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 FOXJ3Q9UPW0 622 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 TRABD2BA6NFA1 517 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 CD8B2A6NJW9 211 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 ZNF716A6NP11 495 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 RAD1O60671 282 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 CSF3P09919 207 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 TCN2P20062 427 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 OTX1P32242 354 aaPredicted RBP6.39□□□□□ -1.39
NPHP1-201ENST00000316534 S100A5P33763 92 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 PPM1FP49593 454 aaPredicted RBP6.39□□□□□ -1.39
NPHP1-201ENST00000316534 MMP16P51512 607 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 CLDN15P56746 228 aa6.39□□□□□ -1.39
NPHP1-201ENST00000316534 LSM6P62312 80 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms