RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 GLSO94925 669 aaPredicted RBP13.51□□□□□ -0.25
TFE3-201ENST00000315869 DRD1P21728 446 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 H2BFSP57053 126 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 GK2Q14410 553 aaPredicted RBP13.51□□□□□ -0.25
TFE3-201ENST00000315869 CD226Q15762 336 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 UNQ9370/PRO34162Q6UXP9 181 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 C17orf107Q6ZR85 190 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 SLC22A18ASQ8N1D0 253 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 CCDC74AQ96AQ1 378 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 KTI12Q96EK9 354 aaPredicted RBP13.51□□□□□ -0.25
TFE3-201ENST00000315869 LPAR4Q99677 370 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 MICU1Q9BPX6 476 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 PTDSS2Q9BVG9 487 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 EMC3Q9P0I2 261 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 CGGBP1Q9UFW8 167 aaPredicted RBP13.51□□□□□ -0.25
TFE3-201ENST00000315869 ICAM5Q9UMF0 924 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 NOP16Q9Y3C1 178 aaKnown RBP13.51□□□□□ -0.25
TFE3-201ENST00000315869 MED12Q93074 2177 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 SDC3O75056 442 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 SLC25A12O75746 678 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 IGF2P01344 180 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 CALCBP10092 127 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 MRPS10P82664 201 aaKnown RBP13.51□□□□□ -0.25
TFE3-201ENST00000315869 SLC35D3Q5M8T2 416 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 ELFN2Q5R3F8 820 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 LINC01590Q5TEZ4 76 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 B3GNTL1Q67FW5 361 aaPredicted RBP13.51□□□□□ -0.25
TFE3-201ENST00000315869 CHST4Q8NCG5 386 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 ZNF417Q8TAU3 575 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 PHYHIPQ92561 330 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 KLHL15Q96M94 604 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 INTS14Q96SY0 518 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 POLE3Q9NRF9 147 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 PLEKHA6Q9Y2H5 1048 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 KIF26BQ2KJY2 2108 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 BDP1A6H8Y1 2624 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 EFCAB7A8K855 629 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 CCSO14618 274 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 ARPC3O15145 178 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 NMBP08949 121 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 CXCR1P25024 350 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 TACR3P29371 465 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 RAB11BQ15907 218 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 CCDC157Q569K6 752 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 C1QL3Q5VWW1 255 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 VSTM2LQ96N03 204 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 AMELYQ99218 206 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 ZNF426Q9BUY5 554 aa13.51□□□□□ -0.25
TFE3-201ENST00000315869 TGFBR3LH3BV60 316 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 EIF1AYO14602 144 aaKnown RBP13.5□□□□□ -0.25
TFE3-201ENST00000315869 RAB3DO95716 219 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 TNFP01375 233 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 AKAIN1P0CW23 69 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 AKT2P31751 481 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 CD163Q86VB7 1156 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 BEST3Q8N1M1 668 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 KDM8Q8N371 416 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 FAM174AQ8TBP5 190 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 CTHRC1Q96CG8 243 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 MNTQ99583 582 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 STEAP1Q9UHE8 339 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 OPN4Q9UHM6 478 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 GGT3PA6NGU5 568 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 PPP3CBP16298 524 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 ACHEP22303 614 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 SKP1P63208 163 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 SPOCK1Q08629 439 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 C2orf76Q3KRA6 126 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 CASTOR1Q8WTX7 329 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 FAM3DQ96BQ1 224 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 LMAN1LQ9HAT1 526 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 COMMD9Q9P000 198 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 FBXO4Q9UKT5 387 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 NPTNQ9Y639 398 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 FREM3P0C091 2139 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 CUL9Q8IWT3 2517 aa13.5□□□□□ -0.25
TFE3-201ENST00000315869 TNFSF14O43557 240 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 CDC40O60508 579 aaKnown RBP eCLIP13.49□□□□□ -0.25
TFE3-201ENST00000315869 CT45A8P0DMV1 189 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 CT45A9P0DMV2 189 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 ZNF28P17035 718 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 CCINQ13939 588 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 CT45A2Q5DJT8 189 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 NHLRC3Q5JS37 347 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 WBP2NLQ6ICG8 309 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 STEAP1BQ6NZ63 245 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 LRFN4Q6PJG9 635 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 ZNF546Q86UE3 836 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 SPICQ8N5J4 248 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 ZNF471Q9BX82 626 aaPredicted RBP13.49□□□□□ -0.25
TFE3-201ENST00000315869 ZCCHC4Q9H5U6 513 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 FITM1A5D6W6 292 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 C17orf105B2RV13 164 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 H7C417 338 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 SLC16A7O60669 478 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 APEHP13798 732 aaKnown RBP13.49□□□□□ -0.25
TFE3-201ENST00000315869 SDHAP31040 664 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 GGTLC2Q14390 218 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 ZNF74Q16587 644 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 GRAMD2AQ8IUY3 354 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms