RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 GPLD1P80108 840 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 SGCBQ16585 318 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 NKAIN1Q4KMZ8 207 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 EMC4Q5J8M3 183 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 SLC22A10Q63ZE4 541 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 MAMSTRQ6ZN01 415 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 NDUFAF7Q7L592 441 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 GRINAQ7Z429 371 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 SLC41A2Q96JW4 573 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 RAB33BQ9H082 229 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 GHITMQ9H3K2 345 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 HRASLSQ9HDD0 168 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 GDF9O60383 454 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 ZNF780AO75290 641 aaPredicted RBP10.41□□□□□ -0.74
PTPN2-201ENST00000309660 SCRG1O75711 98 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 IFNGR1P15260 489 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 CCR9P51686 369 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 SNTA1Q13424 505 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 KLF9Q13886 244 aaPredicted RBP10.41□□□□□ -0.74
PTPN2-201ENST00000309660 COL19A1Q14993 1142 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 WDR45BQ5MNZ6 344 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 TIGD3Q6B0B8 471 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 SLC18B1Q6NT16 456 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 PAPD4Q6PIY7 484 aaKnown RBP10.41□□□□□ -0.74
PTPN2-201ENST00000309660 ZNF227Q86WZ6 799 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 DND1Q8IYX4 353 aaKnown RBP10.41□□□□□ -0.74
PTPN2-201ENST00000309660 OR2I1PQ8NGU4 316 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 OR8S1Q8NH09 359 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 HAVCR2Q8TDQ0 301 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 LIPHQ8WWY8 451 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 SCMH1Q96GD3 660 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 SEC22CQ9BRL7 303 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 NIPAL2Q9H841 368 aa10.41□□□□□ -0.74
PTPN2-201ENST00000309660 DCDC2BA2VCK2 349 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 ANKRD34BA5PLL1 514 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 TMEM212A6NML5 194 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 NPIPA5E9PKD4 350 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 KDM4BO94953 1096 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 TXNDC12O95881 172 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 ZNF823P16415 610 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 KIR3DL2P43630 455 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 EFNB2P52799 333 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 INPP5JQ15735 1006 aaPredicted RBP10.4□□□□□ -0.74
PTPN2-201ENST00000309660 SPEM1Q8N4L4 309 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 PCNPQ8WW12 178 aaKnown RBP10.4□□□□□ -0.74
PTPN2-201ENST00000309660 PHYHIPQ92561 330 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 NKD1Q969G9 470 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 SHDQ96IW2 340 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 C4orf45Q96LM5 186 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 HYLS1Q96M11 299 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 DCBLD2Q96PD2 775 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 FBXL3Q9UKT7 428 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 NPIPA1Q9UND3 350 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 FOXJ3Q9UPW0 622 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 MUC3AQ02505 3323 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 RLN1P04808 185 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 TAS2R20P59543 309 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 TLE3Q04726 772 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 MFGE8Q08431 387 aaPredicted RBP10.4□□□□□ -0.74
PTPN2-201ENST00000309660 GSG1Q2KHT4 349 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 PHF19Q5T6S3 580 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 NUP54Q7Z3B4 507 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 GPAT4Q86UL3 456 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 ABHD6Q9BV23 337 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 ZMAT3Q9HA38 289 aaKnown RBP10.4□□□□□ -0.74
PTPN2-201ENST00000309660 APMAPQ9HDC9 416 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 MRPL22Q9NWU5 206 aaKnown RBP10.4□□□□□ -0.74
PTPN2-201ENST00000309660 EMC9Q9Y3B6 208 aa10.4□□□□□ -0.74
PTPN2-201ENST00000309660 TRAV18A0A075B6X5 111 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 GABARAPH6UMI1 98 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 GIMD1P0DJR0 217 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 POU3F3P20264 500 aaPredicted RBP10.39□□□□□ -0.75
PTPN2-201ENST00000309660 PTH2RP49190 550 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 GUCA2AQ02747 115 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 GLO1Q04760 184 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 SLC17A1Q14916 467 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 LYPD8Q6UX82 237 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 BAIAP2L2Q6UXY1 529 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 JAGN1Q8N5M9 183 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 OR56B4Q8NH76 319 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 OR8B4Q96RC9 309 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.39□□□□□ -0.754e-8■■□□□ 12.1
PTPN2-201ENST00000309660 TXNIPQ9H3M7 391 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 ZCCHC4Q9H5U6 513 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 AKAP7Q9P0M2 348 aaPredicted RBP10.39□□□□□ -0.75
PTPN2-201ENST00000309660 EIF3KQ9UBQ5 218 aaKnown RBP10.39□□□□□ -0.75
PTPN2-201ENST00000309660 ZNF69Q9UC07 566 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 CGGBP1Q9UFW8 167 aaPredicted RBP10.39□□□□□ -0.75
PTPN2-201ENST00000309660 SLC23A1Q9UHI7 598 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 DHDHQ9UQ10 334 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 URB1O60287 2271 aaKnown RBP10.39□□□□□ -0.75
PTPN2-201ENST00000309660 WDFY3Q8IZQ1 3526 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 SLC22A23A1A5C7 686 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 FADS1O60427 444 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 MT-ATP6P00846 226 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 ANXA7P20073 488 aaKnown RBP10.39□□□□□ -0.75
PTPN2-201ENST00000309660 PSMB1P20618 241 aaKnown RBP10.39□□□□□ -0.75
PTPN2-201ENST00000309660 POU3F4P49335 361 aa10.39□□□□□ -0.75
PTPN2-201ENST00000309660 RIDAP52758 137 aaKnown RBP10.39□□□□□ -0.75
PTPN2-201ENST00000309660 EMP2P54851 167 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms