RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 KIRREL2Q6UWL6 708 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 ESX1Q8N693 406 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 ZPLD1Q8TCW7 415 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 SMIM4Q8WVI0 70 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 EVA1AQ9H8M9 152 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 NCDNQ9UBB6 729 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 ZNF281Q9Y2X9 895 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 TTLL8A6PVC2 850 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 RAB6AP20340 208 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 NME2P22392 152 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 MAPK3P27361 379 aaPredicted RBP11.55□□□□□ -0.56
RETREG3-201ENST00000309428 LIMS1P48059 325 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 RAB11BQ15907 218 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 LPAL2Q16609 132 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 ULK3Q6PHR2 472 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 NR2C2APQ86WQ0 139 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 ZNF248Q8NDW4 579 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 OR10H5Q8NGA6 315 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 DHDHQ9UQ10 334 aa11.55□□□□□ -0.56
RETREG3-201ENST00000309428 CACNA1HO95180 2353 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 IFITM5A6NNB3 132 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 KDM4EB2RXH2 506 aaPredicted RBP11.54□□□□□ -0.56
RETREG3-201ENST00000309428 MCRIP1C9JLW8 97 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 CXCR1P25024 350 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 POU3F4P49335 361 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 RAB5BP61020 215 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 MFSD13AQ14CX5 517 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 C3orf33Q6P1S2 294 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 ATRAIDQ6UW56 229 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 LRRC69Q6ZNQ3 347 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 ADGRG3Q86Y34 549 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 CDRT4Q8N9R6 151 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 OR2AK2Q8NG84 335 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 OR4C16Q8NGL9 310 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 HSD17B8Q92506 261 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 ZNF681Q96N22 645 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 ALG12Q9BV10 488 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 CACNA1DQ01668 2161 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 NAP1L6A6NFF2 107 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 H3BML4 177 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 B3GALNT1O75752 331 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 AGR2O95994 175 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 HOXB5P09067 269 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 CAPZA1P52907 286 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 PDZK1IP1Q13113 114 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 NSDHLQ15738 373 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 KIF26BQ2KJY2 2108 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 LRRK1Q38SD2 2015 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 STEAP1BQ6NZ63 245 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 SLC16A13Q7RTY0 426 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 PELI1Q96FA3 418 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 GPR137Q96N19 417 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 NUDT22Q9BRQ3 303 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 ZNF700Q9H0M5 742 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 CHRDQ9H2X0 955 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 POFUT1Q9H488 388 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 IL20Q9NYY1 176 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 GLS2Q9UI32 602 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 SF3B6Q9Y3B4 125 aaKnown RBP11.54□□□□□ -0.56
RETREG3-201ENST00000309428 WDFY3Q8IZQ1 3526 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 MUC3AQ02505 3323 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 ARRDC5A6NEK1 342 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 TMEM200CA6NKL6 621 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 GPR89AB7ZAQ6 455 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 ZNF878C9JN71 531 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 GABARAPH6UMI1 98 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 SERPINA5P05154 406 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 GPR89BP0CG08 455 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 AGTR1P30556 359 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 PDSS1Q5T2R2 415 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 C1QL3Q5VWW1 255 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 RPL22L1Q6P5R6 122 aaKnown RBP11.54□□□□□ -0.56
RETREG3-201ENST00000309428 TMEM151BQ8IW70 566 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 GPR119Q8TDV5 335 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 MOAP1Q96BY2 351 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 FBXO17Q96EF6 278 aa11.54□□□□□ -0.56
RETREG3-201ENST00000309428 MEPEQ9NQ76 525 aaPredicted RBP11.54□□□□□ -0.56
RETREG3-201ENST00000309428 SHISA8B8ZZ34 492 aa11.53□□□□□ -0.56
RETREG3-201ENST00000309428 TMEM150CB9EJG8 249 aa11.53□□□□□ -0.56
RETREG3-201ENST00000309428 SYT5O00445 386 aa11.53□□□□□ -0.56
RETREG3-201ENST00000309428 GIPP09681 153 aaPredicted RBP11.53□□□□□ -0.56
RETREG3-201ENST00000309428 ZGLP1P0C6A0 271 aa11.53□□□□□ -0.56
RETREG3-201ENST00000309428 UBBP0CG47 229 aa11.53□□□□□ -0.56
RETREG3-201ENST00000309428 UBCP0CG48 685 aaKnown RBP11.53□□□□□ -0.56
RETREG3-201ENST00000309428 ZP3P21754 424 aa11.53□□□□□ -0.56
RETREG3-201ENST00000309428 P2RX1P51575 399 aa11.53□□□□□ -0.56
RETREG3-201ENST00000309428 ZNF658BQ4V348 819 aaPredicted RBP11.53□□□□□ -0.56
RETREG3-201ENST00000309428 SVBPQ8N300 66 aa11.53□□□□□ -0.56
RETREG3-201ENST00000309428 MUC20Q8N307 709 aaPredicted RBP11.53□□□□□ -0.56
RETREG3-201ENST00000309428 CLRN3Q8NCR9 226 aa11.53□□□□□ -0.56
RETREG3-201ENST00000309428 ZNF775Q96BV0 537 aaPredicted RBP11.53□□□□□ -0.56
RETREG3-201ENST00000309428 CNTNAP3BQ96NU0 1288 aa11.53□□□□□ -0.56
RETREG3-201ENST00000309428 CMSS1Q9BQ75 279 aaKnown RBP11.53□□□□□ -0.56
RETREG3-201ENST00000309428 CFHR5Q9BXR6 569 aa11.53□□□□□ -0.56
RETREG3-201ENST00000309428 CST11Q9H112 138 aa11.53□□□□□ -0.56
RETREG3-201ENST00000309428 BIN3Q9NQY0 253 aa11.53□□□□□ -0.56
RETREG3-201ENST00000309428 SLC22A11Q9NSA0 550 aa11.53□□□□□ -0.56
RETREG3-201ENST00000309428 SERTM1A2A2V5 107 aa11.53□□□□□ -0.56
RETREG3-201ENST00000309428 C1orf53Q5VUE5 145 aa11.53□□□□□ -0.56
RETREG3-201ENST00000309428 ADAM5Q6NVV9 412 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms