RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 NPR2P20594 1047 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ARR3P36575 388 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ZNF133P52736 654 aaPredicted RBP9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 FXYD6P3P58550 94 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ACTR3P61158 418 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 COX10Q12887 443 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 NPRL3Q12980 569 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ATP6AP1Q15904 470 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 GSG1Q2KHT4 349 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 NRN1LQ496H8 165 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 CLEC12AQ5QGZ9 265 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ADAM5Q6NVV9 412 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ZFP1Q6P2D0 407 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 TMEM53Q6P2H8 277 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SHQ1Q6PI26 577 aaKnown RBP9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 LRFN4Q6PJG9 635 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SLC22A25Q6T423 547 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ZNF627Q7L945 461 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SLC16A14Q7RTX9 510 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 DPPA2Q7Z7J5 298 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 HIPK1Q86Z02 1210 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SLC22A24Q8N4F4 322 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 OR5K1Q8NHB7 308 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 DNAJC9Q8WXX5 260 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 NRBF2Q96F24 287 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 DUS3LQ96G46 650 aaKnown RBP9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 RADILQ96JH8 1075 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SLC38A2Q96QD8 506 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 HS3ST6Q96QI5 342 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 FEVQ99581 238 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 NIPSNAP1Q9BPW8 284 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 RERGLQ9H628 205 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 RNF121Q9H920 327 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 CCNB1IP1Q9NPC3 277 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 TMEM38BQ9NVV0 291 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 FBXL3Q9UKT7 428 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 BAIAP2Q9UQB8 552 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 UTP20O75691 2785 aaKnown RBP9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ABCA4P78363 2273 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SLC22A23A1A5C7 686 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 DPRXA6NFQ7 191 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ARPC3O15145 178 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 MGRN1O60291 552 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 TXNDC12O95881 172 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 CBR1P16152 277 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 CD40P25942 277 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 LOXP28300 417 aaPredicted RBP9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 CRABP1P29762 137 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 PTDSS1P48651 473 aaKnown RBP9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 CDH11P55287 796 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 KRTAP10-9P60411 292 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 KEAP1Q14145 624 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ZSCAN26Q16670 478 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 C3orf36Q3SXR2 165 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SLC36A2Q495M3 483 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 LEG1Q6P5S2 330 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SLC25A47Q6Q0C1 308 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SEZ6L2Q6UXD5 910 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 TMEM179BQ7Z7N9 219 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 CDH24Q86UP0 819 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 MDP1Q86V88 176 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ZDHHC13Q8IUH4 622 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 LRRC18Q8N456 261 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 KBTBD8Q8NFY9 601 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 OR2T33Q8NG76 320 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 PYDC1Q8WXC3 89 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 FBXW5Q969U6 566 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 TSSK6Q9BXA6 273 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SYT4Q9H2B2 425 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SEC61A2Q9H9S3 476 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 IL20Q9NYY1 176 aa9.6□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 IGKV1D-43A0A0B4J1Z2 117 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 IGHV1-18A0A0C4DH31 117 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 G3V2T6 193 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 HS3ST1O14792 307 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SLC16A7O60669 478 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 KHDRBS3O75525 346 aaKnown RBP9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 PLAUP00749 431 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 IFNGP01579 166 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 IGKV3-15P01624 115 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 HLA-HP01893 362 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 CRYAAP02489 173 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 RAF1P04049 648 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 HIST1H1CP16403 213 aaKnown RBP9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 MSR1P21757 451 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 DNASE1P24855 282 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 CDAP32320 146 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 CENPAP49450 140 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 IDH3GP51553 393 aaPredicted RBP9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 MRPS34P82930 218 aaKnown RBP9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 PIGFQ07326 219 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SGCAQ16586 387 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SLC36A3Q495N2 470 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SLC35F1Q5T1Q4 408 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 PAMR1Q6UXH9 720 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 CD300LDQ6UXZ3 194 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 C20orf204Q6ZNR8 217 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 PTCHD4Q6ZW05 846 aa9.59□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 AMIGO2Q86SJ2 522 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms