RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 GKN2Q86XP6 184 aa4.91□□□□□ -1.62
VPS50-202ENST00000305866 SYNPRQ8TBG9 265 aa4.91□□□□□ -1.62
VPS50-202ENST00000305866 HPSE2Q8WWQ2 592 aa4.91□□□□□ -1.62
VPS50-202ENST00000305866 RAB40AQ8WXH6 277 aa4.91□□□□□ -1.62
VPS50-202ENST00000305866 ING5Q8WYH8 240 aa4.91□□□□□ -1.62
VPS50-202ENST00000305866 THRSPQ92748 146 aa4.91□□□□□ -1.62
VPS50-202ENST00000305866 BADQ92934 168 aa4.91□□□□□ -1.62
VPS50-202ENST00000305866 TMEM230Q96A57 120 aa4.91□□□□□ -1.62
VPS50-202ENST00000305866 ERMAPQ96PL5 475 aaPredicted RBP4.91□□□□□ -1.62
VPS50-202ENST00000305866 AKAP7Q9P0M2 348 aaPredicted RBP4.91□□□□□ -1.62
VPS50-202ENST00000305866 FBLN5Q9UBX5 448 aa4.91□□□□□ -1.62
VPS50-202ENST00000305866 PTPRBP23467 1997 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 NPIPA5A0A0B4J1W7 369 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 LILRA5A6NI73 299 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 C2orf74A8MZ97 194 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 CHURC1-FNTBB4DL54 471 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 NPIPA7E9PJI5 369 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 H0YIG0 161 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 MASP2O00187 686 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 OIP5O43482 229 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 SSX5O60225 188 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 SRPX2O60687 465 aaPredicted RBP4.9□□□□□ -1.62
VPS50-202ENST00000305866 SDC3O75056 442 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 KRT33AO76009 404 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 IGHV2-70P01814 119 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 NPIPA8P0DM63 369 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 CT45A8P0DMV1 189 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 CT45A9P0DMV2 189 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 MUC1P15941 1255 aaPredicted RBP4.9□□□□□ -1.62
VPS50-202ENST00000305866 TLX1P31314 330 aaPredicted RBP4.9□□□□□ -1.62
VPS50-202ENST00000305866 PYCR1P32322 319 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 PMELP40967 661 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 ROM1Q03395 351 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 GK2Q14410 553 aaPredicted RBP4.9□□□□□ -1.62
VPS50-202ENST00000305866 CT45A2Q5DJT8 189 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 VWA2Q5GFL6 755 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 HES5Q5TA89 166 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 FAM109BQ6ICB4 259 aaPredicted RBP4.9□□□□□ -1.62
VPS50-202ENST00000305866 OGFOD3Q6PK18 319 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 TMEM205Q6UW68 189 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 OR2W3Q7Z3T1 314 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 RNF144BQ7Z419 303 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 ZNF454Q8N9F8 522 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 GPR148Q8TDV2 347 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 WNT2BQ93097 391 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 MRPL38Q96DV4 380 aaKnown RBP4.9□□□□□ -1.62
VPS50-202ENST00000305866 ART5Q96L15 291 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 ZNF416Q9BWM5 594 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 SLC25A18Q9H1K4 315 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 C11orf1Q9H5F2 150 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.9□□□□□ -1.62
VPS50-202ENST00000305866 CUTCQ9NTM9 273 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 KLHL13Q9P2N7 655 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 PCDHB10Q9UN67 800 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 ZNF281Q9Y2X9 895 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 MED31Q9Y3C7 131 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 NCKAP5O14513 1909 aa4.9□□□□□ -1.62
VPS50-202ENST00000305866 ZFHX4Q86UP3 3567 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 RAB19A4D1S5 217 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 FAM86C2PA6NEL3 165 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 FLRT2O43155 660 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 BNIP3LO60238 219 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 ZNF432O94892 652 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 IGKV3-11P04433 115 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 FCER2P06734 321 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 FCGR3AP08637 254 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 ATF4P18848 351 aaPredicted RBP4.9□□□□□ -1.63
VPS50-202ENST00000305866 CNR1P21554 472 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 DRD1P21728 446 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 HNRNPA2B1P22626 353 aaKnown RBP4.9□□□□□ -1.63
VPS50-202ENST00000305866 MAOBP27338 520 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 RORAP35398 523 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 PSMB10P40306 273 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 PPICP45877 212 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 PRPS1P60891 318 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 SUPT4H1P63272 117 aaKnown RBP4.9□□□□□ -1.63
VPS50-202ENST00000305866 SKP2Q13309 424 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 POM121L1PQ3SYA9 428 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 UQCC3Q6UW78 93 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 TMPPEQ6ZT21 453 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 SERPINA12Q8IW75 414 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 SLC22A18ASQ8N1D0 253 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 OR4N2Q8NGD1 307 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 ZNF519Q8TB69 540 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 ZMYND19Q96E35 227 aaPredicted RBP4.9□□□□□ -1.63
VPS50-202ENST00000305866 LRRC46Q96FV0 321 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 ADAT1Q9BUB4 502 aaKnown RBP4.9□□□□□ -1.63
VPS50-202ENST00000305866 G6PC3Q9BUM1 346 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 ARV1Q9H2C2 271 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 XKR8Q9H6D3 395 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 PRMT8Q9NR22 394 aaPredicted RBP4.9□□□□□ -1.63
VPS50-202ENST00000305866 MRPL22Q9NWU5 206 aaKnown RBP4.9□□□□□ -1.63
VPS50-202ENST00000305866 VSX1Q9NZR4 365 aaPredicted RBP4.9□□□□□ -1.63
VPS50-202ENST00000305866 CLEC1BQ9P126 229 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 ERVK-19Q9WJR5 959 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 NOSIPQ9Y314 301 aaKnown RBP4.9□□□□□ -1.63
VPS50-202ENST00000305866 MRPS18BQ9Y676 258 aaKnown RBP4.9□□□□□ -1.63
VPS50-202ENST00000305866 A0A0A6YYD4 124 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 A0A1W2PP55 124 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 TMEM218A2RU14 115 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms