RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 ANKRD34CP0C6C1 535 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 CBR1P16152 277 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 AGFG1P52594 562 aaKnown RBP12.13□□□□□ -0.47
CASC4-201ENST00000299957 DPY19L2P2Q6ZN68 376 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 TMUB2Q71RG4 321 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 LRRC18Q8N456 261 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 OR51A4Q8NGJ6 313 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 ZNF707Q96C28 371 aaPredicted RBP12.13□□□□□ -0.47
CASC4-201ENST00000299957 KTI12Q96EK9 354 aaPredicted RBP12.13□□□□□ -0.47
CASC4-201ENST00000299957 WDR34Q96EX3 536 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 SLCO1C1Q9NYB5 712 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 FBXO9Q9UK97 447 aaPredicted RBP12.13□□□□□ -0.47
CASC4-201ENST00000299957 PLXNA1Q9UIW2 1896 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 METTL12A8MUP2 240 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 GABARAPH6UMI1 98 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 RAB40ALP0C0E4 278 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 ZGLP1P0C6A0 271 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 PNMTP11086 282 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 P2RX1P51575 399 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 ETFDHQ16134 617 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 RAET1LQ5VY80 246 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 MRM1Q6IN84 353 aaKnown RBP12.13□□□□□ -0.47
CASC4-201ENST00000299957 DCXRQ7Z4W1 244 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 BCORP1Q8N888 145 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 RAB40AQ8WXH6 277 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 MRGPRX1Q96LB2 322 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 VRK1Q99986 396 aaPredicted RBP12.13□□□□□ -0.47
CASC4-201ENST00000299957 TEX101Q9BY14 249 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 ANKRD19PQ9H560 264 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 FLRT3Q9NZU0 649 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 OTOFQ9HC10 1997 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 OR5K4A6NMS3 321 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 H3BUI4 141 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 KCNAB3O43448 404 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 HCRTR1O43613 425 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 SUSD5O60279 629 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 CTSBP07858 339 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 SERPINA2P20848 420 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 CDKN2AP42771 156 aaKnown RBP12.13□□□□□ -0.47
CASC4-201ENST00000299957 SEC61A1P61619 476 aaKnown RBP12.13□□□□□ -0.47
CASC4-201ENST00000299957 ZNF85Q03923 595 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 RASGEF1BQ0VAM2 473 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 ACKR1Q16570 336 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 C9orf135Q5VTT2 229 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 OR52W1Q6IF63 320 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 ZNF587Q96SQ5 575 aaPredicted RBP12.13□□□□□ -0.47
CASC4-201ENST00000299957 TINAGL1Q9GZM7 467 aaPredicted RBP12.13□□□□□ -0.47
CASC4-201ENST00000299957 NXF2Q9GZY0 626 aaKnown RBP12.13□□□□□ -0.47
CASC4-201ENST00000299957 ENTPD2Q9Y5L3 495 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 SPTBN1Q01082 2364 aaKnown RBP12.13□□□□□ -0.47
CASC4-201ENST00000299957 DOCK8Q8NF50 2099 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 NAP1L6A6NFF2 107 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 VSTM2BA6NLU5 285 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 C17orf51A8MQB3 221 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 NPIPB8E9PQR5 432 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 ZNF16P17020 682 aaPredicted RBP12.12□□□□□ -0.47
CASC4-201ENST00000299957 AVPR2P30518 371 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 C2orf76Q3KRA6 126 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 GKN2Q86XP6 184 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 IL17RCQ8NAC3 791 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 C2CD4CQ8TF44 421 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 ZDHHC12Q96GR4 267 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 TMEM74BQ9NUR3 256 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 MN1Q10571 1320 aaPredicted RBP12.12□□□□□ -0.47
CASC4-201ENST00000299957 AIPO00170 330 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 MPZL1O95297 269 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 CFDP00746 253 aaPredicted RBP12.12□□□□□ -0.47
CASC4-201ENST00000299957 POU3F2P20265 443 aaPredicted RBP12.12□□□□□ -0.47
CASC4-201ENST00000299957 CAPZA1P52907 286 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 NR0B2Q15466 257 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 SGCBQ16585 318 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 OR11H4Q8NGC9 324 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 ADAMTS18Q8TE60 1221 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 SMIM4Q8WVI0 70 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 OR2A5Q96R48 311 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 PHB2Q99623 299 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 OR51B6Q9H340 312 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 DTX4Q9Y2E6 619 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 BRINP1O60477 761 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 IFNA21P01568 189 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 FAM53BQ14153 422 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 CA13Q8N1Q1 262 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 OR51T1Q8NGJ9 327 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 DEFB126Q9BYW3 111 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 DLL4Q9NR61 685 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 ANKRD10Q9NXR5 420 aa12.12□□□□□ -0.47
CASC4-201ENST00000299957 NUDT21O43809 227 aaKnown RBP12.11□□□□□ -0.47
CASC4-201ENST00000299957 SRPX2O60687 465 aaPredicted RBP12.11□□□□□ -0.47
CASC4-201ENST00000299957 AKR7A3O95154 331 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 THBS1P07996 1170 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 RABIFP47224 123 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 GSG1Q2KHT4 349 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 TMEM234Q8WY98 164 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 PCDHB16Q9NRJ7 776 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 GPN3Q9UHW5 284 aaPredicted RBP12.11□□□□□ -0.47
CASC4-201ENST00000299957 C14orf166Q9Y224 244 aaKnown RBP12.11□□□□□ -0.47
CASC4-201ENST00000299957 ANKRD36A6QL64 1941 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 CD1CP29017 333 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 LIMS1P48059 325 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 EPHA4P54764 986 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms