RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 CDC6Q99741 560 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 ULBP3Q9BZM4 244 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 CHIAQ9BZP6 476 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 ZNF350Q9GZX5 532 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 HRASLSQ9HDD0 168 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 DUSP22Q9NRW4 184 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 CA10Q9NS85 328 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 RASL12Q9NYN1 266 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 NCDNQ9UBB6 729 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 GPR55Q9Y2T6 319 aaPredicted RBP6.03□□□□□ -1.44
TMC1-201ENST00000297784 LOXL2Q9Y4K0 774 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 PCDHGA1Q9Y5H4 931 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 HEATR5AQ86XA9 2040 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 CNOT1A5YKK6 2376 aaKnown RBP6.03□□□□□ -1.44
TMC1-201ENST00000297784 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.03□□□□□ -1.44
TMC1-201ENST00000297784 TEX46H3BTG2 121 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 CREBL2O60519 120 aaPredicted RBP6.03□□□□□ -1.44
TMC1-201ENST00000297784 KDM4BO94953 1096 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 UMODP07911 640 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 RPA2P15927 270 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 GABRA3P34903 492 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 GDNFP39905 211 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 VEGFCP49767 419 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 AP3S2P59780 193 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 SSTP61278 116 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 IL10RAQ13651 578 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 TMEM255AQ5JRV8 349 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 OR5M10Q6IEU7 315 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 CORO6Q6QEF8 472 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 VRK2Q86Y07 508 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 C9orf40Q8IXQ3 194 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 ARMC10Q8N2F6 343 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 APCDD1LQ8NCL9 501 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 DEFB124Q8NES8 71 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 NFAM1Q8NET5 270 aaPredicted RBP6.03□□□□□ -1.44
TMC1-201ENST00000297784 BPIFCQ8NFQ6 507 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 OR4K5Q8NGD3 323 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 ADAMTS15Q8TE58 950 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 GLYATL2Q8WU03 294 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 THAP4Q8WY91 577 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 LIN37Q96GY3 246 aaPredicted RBP6.03□□□□□ -1.44
TMC1-201ENST00000297784 LRFN5Q96NI6 719 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 GPA33Q99795 319 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 CTPS2Q9NRF8 586 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 MAN2C1Q9NTJ4 1040 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 MBD2Q9UBB5 411 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 MGAQ8IWI9 3026 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 A0A0G2JPF8 293 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 TMEM200CA6NKL6 621 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 DUXAA6NLW8 204 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 HNRNPCL3B7ZW38 293 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 C5orf58C9J3I9 102 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 PROB1E7EW31 1015 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 PRR23D1E9PI22 279 aaPredicted RBP6.03□□□□□ -1.44
TMC1-201ENST00000297784 PEX12O00623 359 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 DVL2O14641 736 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 SSX5O60225 188 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 MT-CO3P00414 261 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 RLN2P04090 185 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 PRR23D2P0DMB1 279 aaPredicted RBP6.03□□□□□ -1.44
TMC1-201ENST00000297784 HNRNPCL4P0DMR1 293 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 RAB3BP20337 219 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 DRD5P21918 477 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 RPS4Y1P22090 263 aaKnown RBP6.03□□□□□ -1.44
TMC1-201ENST00000297784 STAT5AP42229 794 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 NR0B1P51843 470 aaKnown RBP6.03□□□□□ -1.44
TMC1-201ENST00000297784 DLX5P56178 289 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 ERVK-25P63136 954 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 BIKQ13323 160 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 ELAVL1Q15717 326 aaKnown RBP6.03□□□□□ -1.44
TMC1-201ENST00000297784 MPPED2Q15777 294 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 DCST2Q5T1A1 773 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 HES3Q5TGS1 186 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 FIGNL1Q6PIW4 674 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 ANKRD37Q7Z713 158 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 KLBQ86Z14 1044 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 LILRB2Q8N423 598 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 C12orf45Q8N5I9 185 aaPredicted RBP6.03□□□□□ -1.44
TMC1-201ENST00000297784 OR4F15Q8NGB8 312 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 THEM6Q8WUY1 208 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 NUDT9Q9BW91 350 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 PLA2G12AQ9BZM1 189 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 ARL6Q9H0F7 186 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 GSN-AS1Q9NRJ2 163 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 FOXJ2Q9P0K8 574 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 OPN4Q9UHM6 478 aa6.03□□□□□ -1.44
TMC1-201ENST00000297784 TRAV1-2A0A0B4J238 106 aa6.02□□□□□ -1.45
TMC1-201ENST00000297784 A0A1B0GVC2 190 aa6.02□□□□□ -1.45
TMC1-201ENST00000297784 SPAARA0A1B0GVQ0 90 aa6.02□□□□□ -1.45
TMC1-201ENST00000297784 RAB19A4D1S5 217 aa6.02□□□□□ -1.45
TMC1-201ENST00000297784 A6NIN4 97 aa6.02□□□□□ -1.45
TMC1-201ENST00000297784 SULT1C2O00338 296 aa6.02□□□□□ -1.45
TMC1-201ENST00000297784 PLPP2O43688 288 aa6.02□□□□□ -1.45
TMC1-201ENST00000297784 BRINP1O60477 761 aa6.02□□□□□ -1.45
TMC1-201ENST00000297784 EIF4E2O60573 245 aaKnown RBP6.02□□□□□ -1.45
TMC1-201ENST00000297784 EIF1BO60739 113 aaKnown RBP6.02□□□□□ -1.45
TMC1-201ENST00000297784 HEXAP06865 529 aa6.02□□□□□ -1.45
TMC1-201ENST00000297784 ACAA1P09110 424 aaPredicted RBP6.02□□□□□ -1.45
TMC1-201ENST00000297784 ZNF16P17020 682 aaPredicted RBP6.02□□□□□ -1.45
TMC1-201ENST00000297784 EIF1P41567 113 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms