RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 RAB40AQ8WXH6 277 aa17.98■□□□□ 0.47
CXCL16-201ENST00000293778 SCMH1Q96GD3 660 aa17.98■□□□□ 0.47
CXCL16-201ENST00000293778 CCDC74BQ96LY2 380 aa17.98■□□□□ 0.47
CXCL16-201ENST00000293778 WDR77Q9BQA1 342 aaPredicted RBP17.98■□□□□ 0.47
CXCL16-201ENST00000293778 NIPAL2Q9H841 368 aa17.98■□□□□ 0.47
CXCL16-201ENST00000293778 MED11Q9P086 117 aa17.98■□□□□ 0.47
CXCL16-201ENST00000293778 ETV7Q9Y603 341 aa17.98■□□□□ 0.47
CXCL16-201ENST00000293778 TRIOBPQ9H2D6 2365 aa17.98■□□□□ 0.47
CXCL16-201ENST00000293778 TMEM200CA6NKL6 621 aa17.98■□□□□ 0.47
CXCL16-201ENST00000293778 GPR171O14626 319 aa17.98■□□□□ 0.47
CXCL16-201ENST00000293778 MAS1P04201 325 aa17.98■□□□□ 0.47
CXCL16-201ENST00000293778 HLA-DOBP13765 273 aa17.98■□□□□ 0.47
CXCL16-201ENST00000293778 APOBEC1P41238 236 aaKnown RBP17.98■□□□□ 0.47
CXCL16-201ENST00000293778 GZMKP49863 264 aa17.98■□□□□ 0.47
CXCL16-201ENST00000293778 CCR6P51684 374 aa17.98■□□□□ 0.47
CXCL16-201ENST00000293778 PUDPQ08623 228 aa17.98■□□□□ 0.47
CXCL16-201ENST00000293778 FAPQ12884 760 aa17.98■□□□□ 0.47
CXCL16-201ENST00000293778 DND1Q8IYX4 353 aaKnown RBP17.98■□□□□ 0.47
CXCL16-201ENST00000293778 MED28Q9H204 178 aa17.98■□□□□ 0.47
CXCL16-201ENST00000293778 PLEKHA1Q9HB21 404 aa17.98■□□□□ 0.47
CXCL16-201ENST00000293778 AKAP7Q9P0M2 348 aaPredicted RBP17.98■□□□□ 0.47
CXCL16-201ENST00000293778 FOXJ3Q9UPW0 622 aa17.98■□□□□ 0.47
CXCL16-201ENST00000293778 VDAC3Q9Y277 283 aa17.98■□□□□ 0.47
CXCL16-201ENST00000293778 CRABP1P29762 137 aa17.97■□□□□ 0.47
CXCL16-201ENST00000293778 ART1P52961 327 aa17.97■□□□□ 0.47
CXCL16-201ENST00000293778 OR7A5Q15622 319 aa17.97■□□□□ 0.47
CXCL16-201ENST00000293778 ARSKQ6UWY0 536 aa17.97■□□□□ 0.47
CXCL16-201ENST00000293778 OR5L2Q8NGL0 311 aa17.97■□□□□ 0.47
CXCL16-201ENST00000293778 OR8K3Q8NH51 312 aa17.97■□□□□ 0.47
CXCL16-201ENST00000293778 RNF128Q8TEB7 428 aa17.97■□□□□ 0.47
CXCL16-201ENST00000293778 TSEN15Q8WW01 171 aaKnown RBP17.97■□□□□ 0.47
CXCL16-201ENST00000293778 GCDHQ92947 438 aaPredicted RBP17.97■□□□□ 0.47
CXCL16-201ENST00000293778 MIB2Q96AX9 1013 aa17.97■□□□□ 0.47
CXCL16-201ENST00000293778 C8orf44Q96CB5 159 aa17.97■□□□□ 0.47
CXCL16-201ENST00000293778 ARL5BQ96KC2 179 aa17.97■□□□□ 0.47
CXCL16-201ENST00000293778 GHITMQ9H3K2 345 aa17.97■□□□□ 0.47
CXCL16-201ENST00000293778 CACNA1EQ15878 2313 aa17.97■□□□□ 0.47
CXCL16-201ENST00000293778 EXPH5Q8NEV8 1989 aa17.97■□□□□ 0.47
CXCL16-201ENST00000293778 VSTM2BA6NLU5 285 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 GABARAPH6UMI1 98 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 SULT1B1O43704 296 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 NAGAP17050 411 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 CCR9P51686 369 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 ROM1Q03395 351 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 GLO1Q04760 184 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 MFSD13AQ14CX5 517 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 HLA-BQ31612 363 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 TMEM69Q5SWH9 247 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 ZNF385CQ66K41 422 aaPredicted RBP17.96■□□□□ 0.47
CXCL16-201ENST00000293778 KCTD18Q6PI47 426 aaPredicted RBP17.96■□□□□ 0.47
CXCL16-201ENST00000293778 CPEB2Q7Z5Q1 589 aaKnown RBP17.96■□□□□ 0.47
CXCL16-201ENST00000293778 KRT77Q7Z794 578 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 OR52I2Q8NH67 350 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 MFSD8Q8NHS3 518 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 THRSPQ92748 146 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 HAVCR1Q96D42 359 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 KLHL9Q9P2J3 617 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 GTF2A1LQ9UNN4 478 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 A6NIZ1 184 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 CENPBD1B2RD01 187 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 MS4A18H0YCH9 400 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 PTH2RP49190 550 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 RAP1BP61224 184 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 RAP1AP62834 184 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 ZP4Q12836 540 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 EIF2B1Q14232 305 aaKnown RBP17.96■□□□□ 0.47
CXCL16-201ENST00000293778 MS4A18Q3C1V0 323 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 PMS2CLQ68D20 193 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 TTC9Q92623 222 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 MCHR2Q969V1 340 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 CRB3Q9BUF7 120 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 KLRF1Q9NZS2 232 aa17.96■□□□□ 0.47
CXCL16-201ENST00000293778 MRPL15Q9P015 296 aaKnown RBP17.96■□□□□ 0.47
CXCL16-201ENST00000293778 COA3Q9Y2R0 106 aaPredicted RBP17.96■□□□□ 0.47
CXCL16-201ENST00000293778 ALPK2Q86TB3 2170 aa17.95■□□□□ 0.46
CXCL16-201ENST00000293778 NPIPA5E9PKD4 350 aa17.95■□□□□ 0.46
CXCL16-201ENST00000293778 KRT33AO76009 404 aa17.95■□□□□ 0.46
CXCL16-201ENST00000293778 FOXF1Q12946 379 aa17.95■□□□□ 0.46
CXCL16-201ENST00000293778 FCN2Q15485 313 aa17.95■□□□□ 0.46
CXCL16-201ENST00000293778 TEX30Q5JUR7 227 aa17.95■□□□□ 0.46
CXCL16-201ENST00000293778 H1FNTQ75WM6 255 aaPredicted RBP17.95■□□□□ 0.46
CXCL16-201ENST00000293778 BTN2A1Q7KYR7 527 aa17.95■□□□□ 0.46
CXCL16-201ENST00000293778 ZNF227Q86WZ6 799 aa17.95■□□□□ 0.46
CXCL16-201ENST00000293778 PPP1R3BQ86XI6 285 aa17.95■□□□□ 0.46
CXCL16-201ENST00000293778 BMPERQ8N8U9 685 aa17.95■□□□□ 0.46
CXCL16-201ENST00000293778 ZFAND1Q8TCF1 268 aa17.95■□□□□ 0.46
CXCL16-201ENST00000293778 C17orf50Q8WW18 174 aa17.95■□□□□ 0.46
CXCL16-201ENST00000293778 FCAMRQ8WWV6 532 aa17.95■□□□□ 0.46
CXCL16-201ENST00000293778 SPSB2Q99619 263 aa17.95■□□□□ 0.46
CXCL16-201ENST00000293778 CDX2Q99626 313 aaPredicted RBP17.95■□□□□ 0.46
CXCL16-201ENST00000293778 TRAF4Q9BUZ4 470 aaPredicted RBP17.95■□□□□ 0.46
CXCL16-201ENST00000293778 ABHD6Q9BV23 337 aa17.95■□□□□ 0.46
CXCL16-201ENST00000293778 PILRBQ9UKJ0 227 aa17.95■□□□□ 0.46
CXCL16-201ENST00000293778 NPIPA1Q9UND3 350 aa17.95■□□□□ 0.46
CXCL16-201ENST00000293778 SLC22A13Q9Y226 551 aa17.95■□□□□ 0.46
CXCL16-201ENST00000293778 RCE1Q9Y256 329 aa17.95■□□□□ 0.46
CXCL16-201ENST00000293778 ONECUT2O95948 504 aa17.95■□□□□ 0.46
CXCL16-201ENST00000293778 PNPP00491 289 aa17.95■□□□□ 0.46
CXCL16-201ENST00000293778 H2AFB2P0C5Z0 115 aa17.95■□□□□ 0.46
CXCL16-201ENST00000293778 CDK2P24941 298 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms