RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 METTL21EPA6NDL7 271 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 GABARAPH6UMI1 98 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 PTGS2P35354 604 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 MMP15P51511 669 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 KIF26BQ2KJY2 2108 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 PLA1AQ53H76 456 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 PRAMEF20Q5VT98 475 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 COX15Q7KZN9 410 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 GAS2L1Q99501 681 aaPredicted RBP14.43□□□□□ -0.1
SMAD6-201ENST00000288840 FOXQ1Q9C009 403 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 EMC7Q9NPA0 242 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 MMP25Q9NPA2 562 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 TAS2R4Q9NYW5 299 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 ST6GALNAC2Q9UJ37 374 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 COL4A4P53420 1690 aaPredicted RBP14.43□□□□□ -0.1
SMAD6-201ENST00000288840 TMEM235A6NFC5 223 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 ZNF749O43361 778 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 KLF4O43474 513 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 CFIP05156 583 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 ITGA5P08648 1049 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 ZNF250P15622 560 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 AKR1D1P51857 326 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 EFNB1P98172 346 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 FMODQ06828 376 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 PXDC1Q5TGL8 231 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 C8orf44Q96CB5 159 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 C12orf4Q9NQ89 552 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 GMEB2Q9UKD1 530 aa14.43□□□□□ -0.1
SMAD6-201ENST00000288840 PTPRZ1P23471 2315 aaPredicted RBP14.42□□□□□ -0.1
SMAD6-201ENST00000288840 A0A1B0GW55 424 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 OR2AT4A6NND4 320 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 C2CD4DB7Z1M9 353 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 FOXS1O43638 330 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 NSA2O95478 260 aaKnown RBP14.42□□□□□ -0.1
SMAD6-201ENST00000288840 DUX4L2P0CJ85 424 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 DUX4L3P0CJ86 424 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 DUX4L4P0CJ87 422 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 DUX4L5P0CJ88 424 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 DUX4L6P0CJ89 424 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 DUX4L7P0CJ90 424 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 PTBP1P26599 531 aaKnown RBP eCLIP14.42□□□□□ -0.1
SMAD6-201ENST00000288840 RNASE10Q5GAN6 216 aaKnown RBP14.42□□□□□ -0.1
SMAD6-201ENST00000288840 FAM180AQ6UWF9 173 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 TEX261Q6UWH6 196 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 GALNT6Q8NCL4 622 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 GALNT11Q8NCW6 608 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 UPB1Q9UBR1 384 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 DUX4Q9UBX2 424 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 HS3ST3A1Q9Y663 406 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 U3KQ87 197 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 HEATR5AQ86XA9 2040 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 LGALS8O00214 317 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 DCNP07585 359 aaKnown RBP14.42□□□□□ -0.1
SMAD6-201ENST00000288840 RAB40ALP0C0E4 278 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 HSD17B7P56937 341 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 ZBTB37Q5TC79 503 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 DCXRQ7Z4W1 244 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 ZNF283Q8N7M2 679 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 OR6N1Q8NGY5 312 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 RAB40AQ8WXH6 277 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 POTEKPQ9BYX7 375 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 FRRS1LQ9P0K9 344 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 MRM2Q9UI43 246 aaKnown RBP14.42□□□□□ -0.1
SMAD6-201ENST00000288840 ZNF726A6NNF4 738 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 F5H5P2 479 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 TGFBR3LH3BV60 316 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 MPIG6BO95866 241 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 NFYAP23511 347 aaPredicted RBP14.42□□□□□ -0.1
SMAD6-201ENST00000288840 NUP62P37198 522 aaPredicted RBP14.42□□□□□ -0.1
SMAD6-201ENST00000288840 PER3P56645 1201 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 C2orf76Q3KRA6 126 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 TIGD3Q6B0B8 471 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 RELL2Q8NC24 303 aaPredicted RBP14.42□□□□□ -0.1
SMAD6-201ENST00000288840 NUDT9Q9BW91 350 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 B9D1Q9UPM9 204 aa14.42□□□□□ -0.1
SMAD6-201ENST00000288840 ZNF736B4DX44 427 aaPredicted RBP14.41□□□□□ -0.1
SMAD6-201ENST00000288840 E9PQ18 207 aa14.41□□□□□ -0.1
SMAD6-201ENST00000288840 F5H0A9 414 aaPredicted RBP14.41□□□□□ -0.1
SMAD6-201ENST00000288840 SYT7O43581 403 aa14.41□□□□□ -0.1
SMAD6-201ENST00000288840 DUX1O43812 170 aa14.41□□□□□ -0.1
SMAD6-201ENST00000288840 IFNGR1P15260 489 aa14.41□□□□□ -0.1
SMAD6-201ENST00000288840 OR3A2P47893 321 aa14.41□□□□□ -0.1
SMAD6-201ENST00000288840 TOR2AQ5JU69 321 aa14.41□□□□□ -0.1
SMAD6-201ENST00000288840 SFRP5Q5T4F7 317 aa14.41□□□□□ -0.1
SMAD6-201ENST00000288840 C9orf62Q8N4C0 152 aa14.41□□□□□ -0.1
SMAD6-201ENST00000288840 GPBAR1Q8TDU6 330 aa14.41□□□□□ -0.1
SMAD6-201ENST00000288840 FGGYQ96C11 551 aa14.41□□□□□ -0.1
SMAD6-201ENST00000288840 OR5B2Q96R09 309 aa14.41□□□□□ -0.1
SMAD6-201ENST00000288840 OR1F2PQ96R84 312 aa14.41□□□□□ -0.1
SMAD6-201ENST00000288840 WDR77Q9BQA1 342 aaPredicted RBP14.41□□□□□ -0.1
SMAD6-201ENST00000288840 POLE3Q9NRF9 147 aa14.41□□□□□ -0.1
SMAD6-201ENST00000288840 PPP4R1LQ9P1A2 415 aa14.41□□□□□ -0.1
SMAD6-201ENST00000288840 SUSD2Q9UGT4 822 aa14.41□□□□□ -0.1
SMAD6-201ENST00000288840 CLRN1P58418 232 aa14.41□□□□□ -0.1
SMAD6-201ENST00000288840 RASGEF1BQ0VAM2 473 aa14.41□□□□□ -0.1
SMAD6-201ENST00000288840 TMEM205Q6UW68 189 aa14.41□□□□□ -0.1
SMAD6-201ENST00000288840 RHOUQ7L0Q8 258 aa14.41□□□□□ -0.1
SMAD6-201ENST00000288840 KCTD20Q7Z5Y7 419 aa14.41□□□□□ -0.1
SMAD6-201ENST00000288840 MRGPREQ86SM8 312 aa14.41□□□□□ -0.1
SMAD6-201ENST00000288840 BPIFB2Q8N4F0 458 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms