RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 FNDC8Q8TC99 324 aa16.77■□□□□ 0.27
PDLIM3-202ENST00000284770 NMD3Q96D46 503 aaKnown RBP16.77■□□□□ 0.27
PDLIM3-202ENST00000284770 GLRX2Q9NS18 164 aa16.77■□□□□ 0.27
PDLIM3-202ENST00000284770 PARPBPQ9NWS1 579 aa16.77■□□□□ 0.27
PDLIM3-202ENST00000284770 HAO2Q9NYQ3 351 aa16.77■□□□□ 0.27
PDLIM3-202ENST00000284770 CLEC4AQ9UMR7 237 aa16.77■□□□□ 0.27
PDLIM3-202ENST00000284770 B9D1Q9UPM9 204 aa16.77■□□□□ 0.27
PDLIM3-202ENST00000284770 NOSIPQ9Y314 301 aaKnown RBP16.77■□□□□ 0.27
PDLIM3-202ENST00000284770 J3QRE1 110 aa16.76■□□□□ 0.27
PDLIM3-202ENST00000284770 GLCEO94923 617 aa16.76■□□□□ 0.27
PDLIM3-202ENST00000284770 PTHP01270 115 aa16.76■□□□□ 0.27
PDLIM3-202ENST00000284770 LCKP06239 509 aa16.76■□□□□ 0.27
PDLIM3-202ENST00000284770 NR2C1P13056 603 aa16.76■□□□□ 0.27
PDLIM3-202ENST00000284770 CTLA4P16410 223 aa16.76■□□□□ 0.27
PDLIM3-202ENST00000284770 FMODQ06828 376 aa16.76■□□□□ 0.27
PDLIM3-202ENST00000284770 SYT6Q5T7P8 510 aaPredicted RBP16.76■□□□□ 0.27
PDLIM3-202ENST00000284770 PROKR2Q8NFJ6 384 aa16.76■□□□□ 0.27
PDLIM3-202ENST00000284770 OR4F15Q8NGB8 312 aa16.76■□□□□ 0.27
PDLIM3-202ENST00000284770 FCGR1BQ92637 280 aa16.76■□□□□ 0.27
PDLIM3-202ENST00000284770 RORBQ92753 470 aa16.76■□□□□ 0.27
PDLIM3-202ENST00000284770 INTS12Q96CB8 462 aaKnown RBP16.76■□□□□ 0.27
PDLIM3-202ENST00000284770 GMPPAQ96IJ6 420 aaPredicted RBP16.76■□□□□ 0.27
PDLIM3-202ENST00000284770 RERGLQ9H628 205 aa16.76■□□□□ 0.27
PDLIM3-202ENST00000284770 FOXD3Q9UJU5 478 aaPredicted RBP16.76■□□□□ 0.27
PDLIM3-202ENST00000284770 CEPT1Q9Y6K0 416 aa16.76■□□□□ 0.27
PDLIM3-202ENST00000284770 SLC43A1O75387 559 aa16.75■□□□□ 0.27
PDLIM3-202ENST00000284770 MRPL33O75394 65 aaKnown RBP16.75■□□□□ 0.27
PDLIM3-202ENST00000284770 HOXD4P09016 255 aaPredicted RBP16.75■□□□□ 0.27
PDLIM3-202ENST00000284770 GSTT1P30711 240 aa16.75■□□□□ 0.27
PDLIM3-202ENST00000284770 PYCR1P32322 319 aa16.75■□□□□ 0.27
PDLIM3-202ENST00000284770 TTKP33981 857 aa16.75■□□□□ 0.27
PDLIM3-202ENST00000284770 CSNK1A1P48729 337 aa16.75■□□□□ 0.27
PDLIM3-202ENST00000284770 LINC01590Q5TEZ4 76 aa16.75■□□□□ 0.27
PDLIM3-202ENST00000284770 DNM1P34Q6PK57 102 aa16.75■□□□□ 0.27
PDLIM3-202ENST00000284770 RPTNQ6XPR3 784 aa16.75■□□□□ 0.27
PDLIM3-202ENST00000284770 SHFQ7M4L6 423 aa16.75■□□□□ 0.27
PDLIM3-202ENST00000284770 C20orf196Q8IYI0 205 aa16.75■□□□□ 0.27
PDLIM3-202ENST00000284770 TMEM54Q969K7 222 aa16.75■□□□□ 0.27
PDLIM3-202ENST00000284770 RACGAP1Q9H0H5 632 aa16.75■□□□□ 0.27
PDLIM3-202ENST00000284770 GLTPQ9NZD2 209 aa16.75■□□□□ 0.27
PDLIM3-202ENST00000284770 CLEC2DQ9UHP7 191 aa16.75■□□□□ 0.27
PDLIM3-202ENST00000284770 ZNF835Q9Y2P0 537 aa16.75■□□□□ 0.27
PDLIM3-202ENST00000284770 IGLV1-36A0A0B4J1U3 117 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 FAM171A2A8MVW0 826 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 H3BSA7 217 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 PRRG2O14669 202 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 IGHA1P01876 353 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 LCN1P1Q5VSP4 162 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 RTL6Q6ICC9 239 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 OR51G2Q8NGK0 314 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 OR6K6Q8NGW6 343 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 OR6N1Q8NGY5 312 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 CPT1CQ8TCG5 803 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 MCHR2Q969V1 340 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 TM9SF2Q99805 663 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 JAM3Q9BX67 310 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 LSM2Q9Y333 95 aaKnown RBP16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 USP24Q9UPU5 2620 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 IGKV1D-43A0A0B4J1Z2 117 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 SLC19A2O60779 497 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 SS18L1O75177 396 aaPredicted RBP16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 QDPRP09417 244 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 AGTR1P30556 359 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 CENPAP49450 140 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 ETV1P50549 477 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 GTF2A1P52655 376 aaPredicted RBP16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 RBPJQ06330 500 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 DOC2BQ14184 412 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 GGTLC2Q14390 218 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 ETFDHQ16134 617 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 C1orf185Q5T7R7 199 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 OR2A2Q6IF42 318 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 LRFN4Q6PJG9 635 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 C9orf106Q8NAJ2 232 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 ZMYND19Q96E35 227 aaPredicted RBP16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 ZNF649Q9BS31 505 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 ADGRL4Q9HBW9 690 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 FAM215AQ9Y5M1 114 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 SVILO95425 2214 aa16.74■□□□□ 0.27
PDLIM3-202ENST00000284770 MBD3L4A6NDZ8 208 aaPredicted RBP16.73■□□□□ 0.27
PDLIM3-202ENST00000284770 MBD3L3A6NE82 208 aaPredicted RBP16.73■□□□□ 0.27
PDLIM3-202ENST00000284770 MBD3L5A6NJ08 208 aaPredicted RBP16.73■□□□□ 0.27
PDLIM3-202ENST00000284770 KHDRBS3O75525 346 aaKnown RBP16.73■□□□□ 0.27
PDLIM3-202ENST00000284770 ATP6V1E1P36543 226 aa16.73■□□□□ 0.27
PDLIM3-202ENST00000284770 ZNF133P52736 654 aaPredicted RBP16.73■□□□□ 0.27
PDLIM3-202ENST00000284770 POU4F2Q12837 409 aa16.73■□□□□ 0.27
PDLIM3-202ENST00000284770 NFATC3Q12968 1075 aa16.73■□□□□ 0.27
PDLIM3-202ENST00000284770 PHYHD1Q5SRE7 291 aa16.73■□□□□ 0.27
PDLIM3-202ENST00000284770 SLC25A47Q6Q0C1 308 aa16.73■□□□□ 0.27
PDLIM3-202ENST00000284770 NANOGP1Q8N7R0 232 aa16.73■□□□□ 0.27
PDLIM3-202ENST00000284770 MBD3L2Q8NHZ7 208 aaPredicted RBP16.73■□□□□ 0.27
PDLIM3-202ENST00000284770 TP63Q9H3D4 680 aaPredicted RBP16.73■□□□□ 0.27
PDLIM3-202ENST00000284770 ERGIC3Q9Y282 383 aa16.73■□□□□ 0.27
PDLIM3-202ENST00000284770 COA3Q9Y2R0 106 aaPredicted RBP16.73■□□□□ 0.27
PDLIM3-202ENST00000284770 GTF3C1Q12789 2109 aa16.73■□□□□ 0.27
PDLIM3-202ENST00000284770 SBK2P0C263 348 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 LIMS3P0CW19 117 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 LIMS4P0CW20 117 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 PSMB9P28065 219 aa16.72■□□□□ 0.27
PDLIM3-202ENST00000284770 BLVRAP53004 296 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 247.1 ms