RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 CBR3O75828 277 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 SC5DO75845 299 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 SCELO95171 688 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 TBX6O95947 436 aaPredicted RBP2.39□□□□□ -2.03
CHD1-201ENST00000284049 RENP00797 406 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 SAA4P35542 130 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 NUP107P57740 925 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 UBE2MP61081 183 aaKnown RBP2.39□□□□□ -2.03
CHD1-201ENST00000284049 DGCR2P98153 550 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 PUDPQ08623 228 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 CCDC58Q4VC31 144 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 HACD2Q6Y1H2 254 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 CREB3L2Q70SY1 520 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 DUSP18Q8NEJ0 188 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 OR6Q1Q8NGQ2 317 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 DYNLL2Q96FJ2 89 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 P2RY13Q9BPV8 354 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 TRIM45Q9H8W5 580 aaPredicted RBP2.39□□□□□ -2.03
CHD1-201ENST00000284049 UBQLN1Q9UMX0 589 aaKnown RBP2.39□□□□□ -2.03
CHD1-201ENST00000284049 CSNK1G3Q9Y6M4 447 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 ZMYM2Q9UBW7 1377 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 PATE3B3GLJ2 98 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 E9PLD3 99 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 SNAI2O43623 268 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 PCDH7O60245 1069 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 SERPINA5P05154 406 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 GM2AP17900 193 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 FUT6P51993 359 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 BIDP55957 195 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 IRF8Q02556 426 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 GUCY2DQ02846 1103 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 RAB40BQ12829 278 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 QRICH1Q2TAL8 776 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 ADAM5Q6NVV9 412 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 ZNF530Q6P9A1 599 aaPredicted RBP2.39□□□□□ -2.03
CHD1-201ENST00000284049 HIPK1Q86Z02 1210 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 SLC30A8Q8IWU4 369 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 KIRREL3Q8IZU9 778 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 VKORC1L1Q8N0U8 176 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 LGALS14Q8TCE9 139 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 SMAP2Q8WU79 429 aaPredicted RBP2.39□□□□□ -2.03
CHD1-201ENST00000284049 ZNF486Q96H40 463 aaPredicted RBP2.39□□□□□ -2.03
CHD1-201ENST00000284049 HIPK2Q9H2X6 1198 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 GPATCH2LQ9NWQ4 482 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 FBXO7Q9Y3I1 522 aa2.39□□□□□ -2.03
CHD1-201ENST00000284049 COL4A5P29400 1685 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 IGHV2-70DA0A0C4DH43 119 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 CLEC18AA5D8T8 446 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 EFCAB7A8K855 629 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 SYCE1LA8MT33 242 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 RAMP3O60896 148 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 IGHV4-31P0DP07 118 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 PROZP22891 400 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 DLX5P56178 289 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 KDSRQ06136 332 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 ST3GAL3Q11203 375 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 GAGE5Q13069 117 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 GAGE6Q13070 117 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 OR4D1Q15615 310 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 TRAM1Q15629 374 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 PPP1R3AQ16821 1122 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 MUC21Q5SSG8 566 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 KHDRBS2Q5VWX1 349 aaKnown RBP2.38□□□□□ -2.03
CHD1-201ENST00000284049 FAHD2BQ6P2I3 314 aaPredicted RBP2.38□□□□□ -2.03
CHD1-201ENST00000284049 CLEC18BQ6UXF7 455 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 TMEM179Q6ZVK1 233 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 LRRC75AQ8NAA5 344 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 CLEC18CQ8NCF0 446 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 ZNF461Q8TAF7 563 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 C8orf46Q8TAG6 207 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 SFXN5Q8TD22 340 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 TOMM40LQ969M1 308 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 ZBED6CLQ96FA7 236 aaPredicted RBP2.38□□□□□ -2.03
CHD1-201ENST00000284049 FAHD2AQ96GK7 314 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 CENPNQ96H22 339 aaPredicted RBP2.38□□□□□ -2.03
CHD1-201ENST00000284049 VAT1Q99536 393 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 APOL2Q9BQE5 337 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 POLR2J2Q9GZM3 115 aaKnown RBP2.38□□□□□ -2.03
CHD1-201ENST00000284049 POLR2J3Q9H1A7 115 aaKnown RBP2.38□□□□□ -2.03
CHD1-201ENST00000284049 CLMPQ9H6B4 373 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 MAP6D1Q9H9H5 199 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 PELI2Q9HAT8 420 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 PLAC1Q9HBJ0 212 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 AGPAT4Q9NRZ5 378 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 ZNF701Q9NV72 531 aaPredicted RBP2.38□□□□□ -2.03
CHD1-201ENST00000284049 CCDC88AQ3V6T2 1871 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 PTPRFP10586 1907 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 TRBV5-5A0A0J9YX44 114 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 SMIM35A0A1B0GVV1 85 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 KDELR3O43731 214 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 CCKBRP32239 447 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 FOXN2P32314 431 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 CSKP41240 450 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 TAS2R60P59551 318 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 RAB4BP61018 213 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 ALX1Q15699 326 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 MS4A18Q3C1V0 323 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 TIGD3Q6B0B8 471 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 FAM45BPQ6NSW5 357 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 ARMCX5Q6P1M9 558 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms