RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 PATE4P0C8F1 98 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 ZNF23P17027 643 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 ZNF26P17031 533 aaPredicted RBP5.7□□□□□ -1.5
CD44-204ENST00000279452 GSTM3P21266 225 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 FASP25445 335 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 ARR3P36575 388 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 ART1P52961 327 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 RAB1AP62820 205 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 GALK2Q01415 458 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 PLP2Q04941 152 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 FHL1Q13642 323 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 CCNIQ14094 377 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 RFX4Q33E94 735 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 SLC36A2Q495M3 483 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 ZNF672Q499Z4 452 aaPredicted RBP5.7□□□□□ -1.5
CD44-204ENST00000279452 THEM4Q5T1C6 240 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 GPR139Q6DWJ6 353 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 RPL13AP3Q6NVV1 102 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 LRFN4Q6PJG9 635 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 DNM1P34Q6PK57 102 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 SEZ6L2Q6UXD5 910 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 C20orf204Q6ZNR8 217 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 ADCK1Q86TW2 530 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 SKA3Q8IX90 412 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 CCDC36Q8IYA8 594 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 HS3ST5Q8IZT8 346 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 ICA1LQ8NDH6 482 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 SDR9C7Q8NEX9 313 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 OR52E2Q8NGJ4 325 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 OR4K13Q8NH42 304 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 ZNF519Q8TB69 540 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 TMEM171Q8WVE6 324 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 OTULINQ96BN8 352 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 KCNK17Q96T54 332 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 FEVQ99581 238 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 TSSK6Q9BXA6 273 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 MRPL13Q9BYD1 178 aaKnown RBP5.7□□□□□ -1.5
CD44-204ENST00000279452 SYT4Q9H2B2 425 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 FN3KQ9H479 309 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 PLEKHF2Q9H8W4 249 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 SMURF2Q9HAU4 748 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 NOX3Q9HBY0 568 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 MOV10Q9HCE1 1003 aaKnown RBP5.7□□□□□ -1.5
CD44-204ENST00000279452 NRIP3Q9NQ35 241 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 RPRD1BQ9NQG5 326 aaKnown RBP5.7□□□□□ -1.5
CD44-204ENST00000279452 FAIMQ9NVQ4 179 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 ARMC1Q9NVT9 282 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 CISD1Q9NZ45 108 aaKnown RBP5.7□□□□□ -1.5
CD44-204ENST00000279452 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.7□□□□□ -1.5
CD44-204ENST00000279452 LAMP3Q9UQV4 416 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 AP4S1Q9Y587 144 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 CDH10Q9Y6N8 788 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 FLNCQ14315 2725 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 HECTD1Q9ULT8 2610 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 PRRC2CQ9Y520 2896 aaKnown RBP5.69□□□□□ -1.5
CD44-204ENST00000279452 ICE1Q9Y2F5 2266 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 CACNA1CQ13936 2221 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 IGKV1D-43A0A0B4J1Z2 117 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 IQCMA0A1B0GVH7 501 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 SLC22A23A1A5C7 686 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 ZNF503-AS2A6NEH8 195 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 SMPD2O60906 423 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 PTP4A3O75365 173 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 KHDRBS3O75525 346 aaKnown RBP5.69□□□□□ -1.5
CD44-204ENST00000279452 ATE1O95260 518 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 IFNGP01579 166 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 IGFBP1P08833 259 aaPredicted RBP5.69□□□□□ -1.5
CD44-204ENST00000279452 FCGR1AP12314 374 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 CBR1P16152 277 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 HIST1H1CP16403 213 aaKnown RBP5.69□□□□□ -1.5
CD44-204ENST00000279452 NPR2P20594 1047 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 MSR1P21757 451 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 PRKACGP22612 351 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 CCNOP22674 350 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 PAX7P23759 505 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 LOXP28300 417 aaPredicted RBP5.69□□□□□ -1.5
CD44-204ENST00000279452 LAP3P28838 519 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 APLNRP35414 380 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 GSSP48637 474 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 FABP6P51161 128 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 HMGA2P52926 109 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 FXYD6P3P58550 94 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 NAAAQ02083 359 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.69□□□□□ -1.5
CD44-204ENST00000279452 GK3PQ14409 553 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 RAB39AQ14964 217 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 KPNB1Q14974 876 aaKnown RBP5.69□□□□□ -1.5
CD44-204ENST00000279452 HIST3H3Q16695 136 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 SLC36A3Q495N2 470 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 C10orf128Q5T292 105 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 OTPQ5XKR4 325 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 KRT80Q6KB66 452 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 NHLRC1Q6VVB1 395 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 RASSF6Q6ZTQ3 369 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 ASRGL1Q7L266 308 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 FAM122BQ7Z309 247 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 TMEM179BQ7Z7N9 219 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 AMIGO2Q86SJ2 522 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 FBXL14Q8N1E6 418 aa5.69□□□□□ -1.5
CD44-204ENST00000279452 IQCF1Q8N6M8 205 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms