RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 DSCR4P56555 118 aaPredicted RBP8.59□□□□□ -1.03
TRIM55-201ENST00000276573 GLO1Q04760 184 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 SCN1BQ07699 218 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 SELENBP1Q13228 472 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 RIN1Q13671 783 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 ZNF239Q16600 458 aaKnown RBP8.59□□□□□ -1.03
TRIM55-201ENST00000276573 SLC18B1Q6NT16 456 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 FDX2Q6P4F2 183 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 DNM1P34Q6PK57 102 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 SYT9Q86SS6 491 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 CADM3Q8N126 398 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 GTPBP8Q8N3Z3 284 aaPredicted RBP8.59□□□□□ -1.03
TRIM55-201ENST00000276573 OR1J4Q8NGS1 313 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 OR2G2Q8NGZ5 317 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 OR5AK2Q8NH90 309 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 NSMAFQ92636 917 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 SGCZQ96LD1 299 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 GNRHR2Q96P88 292 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 DCBLD2Q96PD2 775 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 NEURL2Q9BR09 285 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 EDEM2Q9BV94 578 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 TMEM185BQ9H7F4 350 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 ELOVL3Q9HB03 270 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 B3GAT2Q9NPZ5 323 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 CYSLTR2Q9NS75 346 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 MED29Q9NX70 200 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 KLHL13Q9P2N7 655 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 B3GAT1Q9P2W7 334 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 HDGFL3Q9Y3E1 203 aa8.59□□□□□ -1.03
TRIM55-201ENST00000276573 RALGAPA1Q6GYQ0 2036 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 A0A087WV48 116 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 A0A1W2PQ09 198 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 KHDRBS3O75525 346 aaKnown RBP8.58□□□□□ -1.04
TRIM55-201ENST00000276573 SPARCP09486 303 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 MAGEB1P43366 347 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 BIDP55957 195 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 ADAM8P78325 824 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 ROM1Q03395 351 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 MADCAM1Q13477 382 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 P2RY14Q15391 338 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 MEP1BQ16820 701 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 TEX30Q5JUR7 227 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 TMEM164Q5U3C3 297 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 TIGD3Q6B0B8 471 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 CCBE1Q6UXH8 406 aaPredicted RBP8.58□□□□□ -1.04
TRIM55-201ENST00000276573 LRRC69Q6ZNQ3 347 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.58□□□□□ -1.04
TRIM55-201ENST00000276573 LRRC28Q86X40 367 aaPredicted RBP8.58□□□□□ -1.04
TRIM55-201ENST00000276573 UEVLDQ8IX04 471 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 ZNF679Q8IYX0 411 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 PRSS35Q8N3Z0 413 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 ZNF454Q8N9F8 522 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 DERL3Q96Q80 235 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 ABHD6Q9BV23 337 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 EMC6Q9BV81 110 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 MRPL13Q9BYD1 178 aaKnown RBP8.58□□□□□ -1.04
TRIM55-201ENST00000276573 FOXJ2Q9P0K8 574 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 KLHL9Q9P2J3 617 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 MALT1Q9UDY8 824 aa8.58□□□□□ -1.04
TRIM55-201ENST00000276573 AK6Q9Y3D8 172 aaKnown RBP8.58□□□□□ -1.04
TRIM55-201ENST00000276573 IGKV1D-43A0A0B4J1Z2 117 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 TRBV5-5A0A0J9YX44 114 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 LOC102725191A0A1B0GVB3 256 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 ACOD1A6NK06 481 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 G3V3Y1 287 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 CBR3O75828 277 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 ZNF432O94892 652 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 PAHP00439 452 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 SERPINA7P05543 415 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 HNRNPCP07910 306 aaKnown RBP eCLIP8.57□□□□□ -1.04
TRIM55-201ENST00000276573 ZNF823P16415 610 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 NPR2P20594 1047 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 SFTPDP35247 375 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 SLC35A1P78382 337 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 FMODQ06828 376 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 SPEM2Q0P670 501 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 EIF3IQ13347 325 aaKnown RBP8.57□□□□□ -1.04
TRIM55-201ENST00000276573 EIF2B1Q14232 305 aaKnown RBP8.57□□□□□ -1.04
TRIM55-201ENST00000276573 PCK2Q16822 640 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 Q499Y3 187 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 B3GNTL1Q67FW5 361 aaPredicted RBP8.57□□□□□ -1.04
TRIM55-201ENST00000276573 TMEM225Q6GV28 225 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 KCTD18Q6PI47 426 aaPredicted RBP8.57□□□□□ -1.04
TRIM55-201ENST00000276573 LRRN1Q6UXK5 716 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 TMPPEQ6ZT21 453 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 MDGA2Q7Z553 956 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 ESX1Q8N693 406 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 SLC26A10Q8NG04 563 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 TRMT10AQ8TBZ6 339 aaKnown RBP8.57□□□□□ -1.04
TRIM55-201ENST00000276573 RNF128Q8TEB7 428 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 MIB2Q96AX9 1013 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 ORAI1Q96D31 301 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 TMEM41AQ96HV5 264 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 OXGR1Q96P68 337 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 RBP7Q96R05 134 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 P4HTMQ9NXG6 502 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 ABRACLQ9P1F3 81 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 PCDHGA1Q9Y5H4 931 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 BDP1A6H8Y1 2624 aa8.57□□□□□ -1.04
TRIM55-201ENST00000276573 EML6Q6ZMW3 1958 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms