RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 PCDHGA1Q9Y5H4 931 aa14.89□□□□□ -0.03
CCDC40-201ENST00000269318 SDK2Q58EX2 2172 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 CENPBD1B2RD01 187 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 ZNF879B4DU55 563 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 TERTO14746 1132 aaKnown RBP14.88□□□□□ -0.03
CCDC40-201ENST00000269318 SEC14L5O43304 696 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 TMCC2O75069 709 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 CSF3P09919 207 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 SPNP16150 400 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 PTBP1P26599 531 aaKnown RBP eCLIP14.88□□□□□ -0.03
CCDC40-201ENST00000269318 RPS15P62841 145 aaKnown RBP14.88□□□□□ -0.03
CCDC40-201ENST00000269318 ROM1Q03395 351 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 EIF3IQ13347 325 aaKnown RBP14.88□□□□□ -0.03
CCDC40-201ENST00000269318 RIN1Q13671 783 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 HSD17B12Q53GQ0 312 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 SLC18B1Q6NT16 456 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 MDGA2Q7Z553 956 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 SYT9Q86SS6 491 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 SUMF1Q8NBK3 374 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 SLC26A10Q8NG04 563 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 OR2G2Q8NGZ5 317 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 SETD6Q8TBK2 473 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 HTRA1Q92743 480 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 SGCZQ96LD1 299 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 GNRHR2Q96P88 292 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 NOX4Q9NPH5 578 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 B3GAT2Q9NPZ5 323 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 P4HTMQ9NXG6 502 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 TTC28Q96AY4 2481 aa14.88□□□□□ -0.03
CCDC40-201ENST00000269318 IGKV1D-43A0A0B4J1Z2 117 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 A0A1B0GTH9 108 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 OR4C45A6NMZ5 311 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 ZNF814B7Z6K7 855 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 G3V3Y1 287 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 MPZL1O95297 269 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 SPARCP09486 303 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 ELK1P19419 428 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 DPP4P27487 766 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 DSCR4P56555 118 aaPredicted RBP14.87□□□□□ -0.03
CCDC40-201ENST00000269318 OR2B6P58173 313 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 ADAM8P78325 824 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 MEP1BQ16820 701 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 TMEM176BQ3YBM2 270 aaPredicted RBP14.87□□□□□ -0.03
CCDC40-201ENST00000269318 TIGD3Q6B0B8 471 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 FDX2Q6P4F2 183 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 DNM1P34Q6PK57 102 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 DHRS13Q6UX07 377 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 ESX1Q8N693 406 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 NSMAFQ92636 917 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 MIB2Q96AX9 1013 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 TMEM41AQ96HV5 264 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 DERL3Q96Q80 235 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 MRPL13Q9BYD1 178 aaKnown RBP14.87□□□□□ -0.03
CCDC40-201ENST00000269318 ADAM30Q9UKF2 790 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 A0A1W2PQ09 198 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 ACOD1A6NK06 481 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 NOTOA8MTQ0 251 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 ZIC3O60481 467 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 SERPINA7P05543 415 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 SLC2A2P11168 524 aaPredicted RBP14.87□□□□□ -0.03
CCDC40-201ENST00000269318 APEX1P27695 318 aaKnown RBP14.87□□□□□ -0.03
CCDC40-201ENST00000269318 SFTPDP35247 375 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 BIDP55957 195 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 SPEM2Q0P670 501 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 SLC17A1Q14916 467 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 P2RY14Q15391 338 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 PCK2Q16822 640 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 PYDC2Q56P42 97 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 B3GNTL1Q67FW5 361 aaPredicted RBP14.87□□□□□ -0.03
CCDC40-201ENST00000269318 ZNF554Q86TJ5 538 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 ZNF679Q8IYX0 411 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 PRSS35Q8N3Z0 413 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 OR1J4Q8NGS1 313 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 OR5AK2Q8NH90 309 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 ELOVL3Q9HB03 270 aa14.87□□□□□ -0.03
CCDC40-201ENST00000269318 TRBV5-5A0A0J9YX44 114 aa14.86□□□□□ -0.03
CCDC40-201ENST00000269318 TRAF3IP2O43734 574 aaPredicted RBP14.86□□□□□ -0.03
CCDC40-201ENST00000269318 EPXP11678 715 aa14.86□□□□□ -0.03
CCDC40-201ENST00000269318 SRMP19623 302 aa14.86□□□□□ -0.03
CCDC40-201ENST00000269318 MAGEB1P43366 347 aa14.86□□□□□ -0.03
CCDC40-201ENST00000269318 MADCAM1Q13477 382 aa14.86□□□□□ -0.03
CCDC40-201ENST00000269318 TMEM164Q5U3C3 297 aa14.86□□□□□ -0.03
CCDC40-201ENST00000269318 LRRN1Q6UXK5 716 aa14.86□□□□□ -0.03
CCDC40-201ENST00000269318 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.86□□□□□ -0.03
CCDC40-201ENST00000269318 LRRC28Q86X40 367 aaPredicted RBP14.86□□□□□ -0.03
CCDC40-201ENST00000269318 UEVLDQ8IX04 471 aa14.86□□□□□ -0.03
CCDC40-201ENST00000269318 ZNF454Q8N9F8 522 aa14.86□□□□□ -0.03
CCDC40-201ENST00000269318 C4orf45Q96LM5 186 aa14.86□□□□□ -0.03
CCDC40-201ENST00000269318 EMC6Q9BV81 110 aa14.86□□□□□ -0.03
CCDC40-201ENST00000269318 CYSLTR2Q9NS75 346 aa14.86□□□□□ -0.03
CCDC40-201ENST00000269318 SSX4O60224 188 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 WNT11O96014 354 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 ATF1P18846 271 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 Q499Y3 187 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 TEX30Q5JUR7 227 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 HES3Q5TGS1 186 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 TMPPEQ6ZT21 453 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 CADM3Q8N126 398 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 PSMF1Q92530 271 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 ORAI1Q96D31 301 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms