RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 SPRY1O43609 319 aaPredicted RBP11.78□□□□□ -0.52
SGCA-201ENST00000262018 NPIPB7O75200 414 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 TRAPPC6AO75865 159 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 PPP1R3DO95685 299 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 BGLAPP02818 100 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 LCKP06239 509 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 ADRA2AP08913 450 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 TSPAN19P0C672 248 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 PRKCAP17252 672 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 HK1P19367 917 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 CRYGSP22914 178 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 PRPS1P60891 318 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 RAB40BQ12829 278 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 KLHL22Q53GT1 634 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 ZNF362Q5T0B9 420 aaPredicted RBP11.78□□□□□ -0.52
SGCA-201ENST00000262018 GPR107Q5VW38 600 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 DPY19L2P2Q6ZN68 376 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 PLCZ1Q86YW0 608 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 GID4Q8IVV7 300 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 LRRC75AQ8NAA5 344 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 IGFBPL1Q8WX77 278 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 TAAR8Q969N4 342 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 KTI12Q96EK9 354 aaPredicted RBP11.78□□□□□ -0.52
SGCA-201ENST00000262018 RNFT2Q96EX2 444 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 SFXN3Q9BWM7 321 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 CALHM2Q9HA72 323 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 PALMDQ9NP74 551 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 NANSQ9NR45 359 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 MED11Q9P086 117 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 CHRNA9Q9UGM1 479 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 ZNF229Q9UJW7 825 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 DIMT1Q9UNQ2 313 aaKnown RBP11.78□□□□□ -0.52
SGCA-201ENST00000262018 HIF3AQ9Y2N7 669 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 SLC6A5Q9Y345 797 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 ROS1P08922 2347 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 FREM3P0C091 2139 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 A8MVM7 634 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 MCIDASD6RGH6 385 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 H3BMQ9 156 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 ARPC3O15145 178 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 IDH3BO43837 385 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 CBR3O75828 277 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 ADORA3P0DMS8 318 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 HTR1FP30939 366 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 APOBEC1P41238 236 aaKnown RBP11.77□□□□□ -0.52
SGCA-201ENST00000262018 MTNR1AP48039 350 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 SERPINB10P48595 397 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 CDH11P55287 796 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 TMED1Q13445 227 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 SLC35F1Q5T1Q4 408 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 VASNQ6EMK4 673 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 OR5M10Q6IEU7 315 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 CPOQ8IVL8 374 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 FADS6Q8N9I5 356 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 WDSUB1Q8N9V3 476 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 OR2M3Q8NG83 312 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 OR52I1Q8NGK6 324 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 OR6S1Q8NH40 331 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 LGALS12Q96DT0 336 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 YIPF6Q96EC8 236 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 COG8Q96MW5 612 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 GNRHR2Q96P88 292 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 MOGAT1Q96PD6 335 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 MED18Q9BUE0 208 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 PTDSS2Q9BVG9 487 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 TAPBPLQ9BX59 468 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 NRIP3Q9NQ35 241 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 H2AFY2Q9P0M6 372 aaPredicted RBP11.77□□□□□ -0.52
SGCA-201ENST00000262018 KLHL21Q9UJP4 597 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 CDC42EP3Q9UKI2 254 aa11.77□□□□□ -0.52
SGCA-201ENST00000262018 CR1P17927 2039 aa11.77□□□□□ -0.53
SGCA-201ENST00000262018 RIIAD1A6NNX1 92 aa11.77□□□□□ -0.53
SGCA-201ENST00000262018 A8MXE2 369 aa11.77□□□□□ -0.53
SGCA-201ENST00000262018 M0R3G1 203 aa11.77□□□□□ -0.53
SGCA-201ENST00000262018 RAB36O95755 333 aa11.77□□□□□ -0.53
SGCA-201ENST00000262018 MT-ATP6P00846 226 aa11.77□□□□□ -0.53
SGCA-201ENST00000262018 PTHP01270 115 aa11.77□□□□□ -0.53
SGCA-201ENST00000262018 IFNGP01579 166 aa11.77□□□□□ -0.53
SGCA-201ENST00000262018 APEHP13798 732 aaKnown RBP11.77□□□□□ -0.53
SGCA-201ENST00000262018 ZNF3P17036 446 aa11.77□□□□□ -0.53
SGCA-201ENST00000262018 PSMB9P28065 219 aa11.77□□□□□ -0.53
SGCA-201ENST00000262018 RPS5P46782 204 aaKnown RBP11.77□□□□□ -0.53
SGCA-201ENST00000262018 FAM27E3Q08E93 113 aa11.77□□□□□ -0.53
SGCA-201ENST00000262018 ITGADQ13349 1161 aa11.77□□□□□ -0.53
SGCA-201ENST00000262018 DCTN2Q13561 401 aaKnown RBP11.77□□□□□ -0.53
SGCA-201ENST00000262018 TIMM50Q3ZCQ8 353 aa11.77□□□□□ -0.53
SGCA-201ENST00000262018 ARMC4Q5T2S8 1044 aa11.77□□□□□ -0.53
SGCA-201ENST00000262018 C1orf140Q5VVS0 124 aa11.77□□□□□ -0.53
SGCA-201ENST00000262018 NIPAL3Q6P499 406 aa11.77□□□□□ -0.53
SGCA-201ENST00000262018 ZNF367Q7RTV3 350 aa11.77□□□□□ -0.53
SGCA-201ENST00000262018 C10orf53Q8N6V4 93 aa11.77□□□□□ -0.53
SGCA-201ENST00000262018 BBS1Q8NFJ9 593 aa11.77□□□□□ -0.53
SGCA-201ENST00000262018 OR4K17Q8NGC6 315 aa11.77□□□□□ -0.53
SGCA-201ENST00000262018 MOSPD2Q8NHP6 518 aa11.77□□□□□ -0.53
SGCA-201ENST00000262018 INTS12Q96CB8 462 aaKnown RBP11.77□□□□□ -0.53
SGCA-201ENST00000262018 WDYHV1Q96HA8 205 aa11.77□□□□□ -0.53
SGCA-201ENST00000262018 MRGPRX4Q96LA9 322 aa11.77□□□□□ -0.53
SGCA-201ENST00000262018 ERMAPQ96PL5 475 aaPredicted RBP11.77□□□□□ -0.53
SGCA-201ENST00000262018 NAA50Q9GZZ1 169 aaKnown RBP11.77□□□□□ -0.53
SGCA-201ENST00000262018 PTGES2Q9H7Z7 377 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms