RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 ACTA2P62736 377 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 ACTG2P63267 376 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 ENPP2Q13822 863 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 RSPO4Q2I0M5 234 aaPredicted RBP11.78□□□□□ -0.52
SNX1-201ENST00000261889 OVCH1Q7RTY7 1134 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 LINC00346Q8IVM7 164 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 PRSS35Q8N3Z0 413 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 CHST4Q8NCG5 386 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 GPR119Q8TDV5 335 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 SLC6A7Q99884 636 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 TRIM2Q9C040 744 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 HRASLS2Q9NWW9 162 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 PILRAQ9UKJ1 303 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 A0A1B0GV50 99 aa11.77□□□□□ -0.53
SNX1-201ENST00000261889 OR2T1O43869 369 aa11.77□□□□□ -0.53
SNX1-201ENST00000261889 DCNP07585 359 aaKnown RBP11.77□□□□□ -0.53
SNX1-201ENST00000261889 GPM6BQ13491 265 aa11.77□□□□□ -0.53
SNX1-201ENST00000261889 LINC01590Q5TEZ4 76 aa11.77□□□□□ -0.53
SNX1-201ENST00000261889 CHRDL2Q6WN34 429 aa11.77□□□□□ -0.53
SNX1-201ENST00000261889 DEFB119Q8N690 84 aa11.77□□□□□ -0.53
SNX1-201ENST00000261889 OR14A16Q8NHC5 309 aa11.77□□□□□ -0.53
SNX1-201ENST00000261889 RSC1A1Q92681 617 aa11.77□□□□□ -0.53
SNX1-201ENST00000261889 MRPL38Q96DV4 380 aaKnown RBP11.77□□□□□ -0.53
SNX1-201ENST00000261889 PCDHB16Q9NRJ7 776 aa11.77□□□□□ -0.53
SNX1-201ENST00000261889 KCNJ13O60928 360 aa11.77□□□□□ -0.53
SNX1-201ENST00000261889 CTAG2O75638 210 aa11.77□□□□□ -0.53
SNX1-201ENST00000261889 GLSO94925 669 aaPredicted RBP11.77□□□□□ -0.53
SNX1-201ENST00000261889 FARS2O95363 451 aaKnown RBP11.77□□□□□ -0.53
SNX1-201ENST00000261889 AP3S2P59780 193 aa11.77□□□□□ -0.53
SNX1-201ENST00000261889 Q499Y3 187 aa11.77□□□□□ -0.53
SNX1-201ENST00000261889 WDR38Q5JTN6 314 aa11.77□□□□□ -0.53
SNX1-201ENST00000261889 GLYATL3Q5SZD4 288 aa11.77□□□□□ -0.53
SNX1-201ENST00000261889 TMPRSS9Q7Z410 1059 aa11.77□□□□□ -0.53
SNX1-201ENST00000261889 NUDCD2Q8WVJ2 157 aa11.77□□□□□ -0.53
SNX1-201ENST00000261889 RBM18Q96H35 190 aaKnown RBP11.77□□□□□ -0.53
SNX1-201ENST00000261889 VRK1Q99986 396 aaPredicted RBP11.77□□□□□ -0.53
SNX1-201ENST00000261889 A8MXK9 166 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 GPR75O95800 540 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 HLA-AP01891 365 aaKnown RBP11.76□□□□□ -0.53
SNX1-201ENST00000261889 HPGDP15428 266 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 MFGE8Q08431 387 aaPredicted RBP11.76□□□□□ -0.53
SNX1-201ENST00000261889 RBM39Q14498 530 aaKnown RBP11.76□□□□□ -0.53
SNX1-201ENST00000261889 RBMS2Q15434 407 aaKnown RBP11.76□□□□□ -0.53
SNX1-201ENST00000261889 FHL5Q5TD97 284 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 C16orf47Q6ZP98 133 aaPredicted RBP11.76□□□□□ -0.53
SNX1-201ENST00000261889 CDH26Q8IXH8 852 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 CSNK1A1LQ8N752 337 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 PXT1Q8NFP0 134 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 PNPLA2Q96AD5 504 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 MIB2Q96AX9 1013 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 CDCA3Q99618 268 aaPredicted RBP11.76□□□□□ -0.53
SNX1-201ENST00000261889 CMSS1Q9BQ75 279 aaKnown RBP11.76□□□□□ -0.53
SNX1-201ENST00000261889 MESP1Q9BRJ9 268 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 ELOVL3Q9HB03 270 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 ACTR10Q9NZ32 417 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 KIF25Q9UIL4 384 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 MSRAQ9UJ68 235 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 COL6A3P12111 3177 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 A0A0B4J2A0 478 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 GGT3PA6NGU5 568 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 DISC1C4P0D8 188 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 F5H0A9 414 aaPredicted RBP11.76□□□□□ -0.53
SNX1-201ENST00000261889 GSTZ1O43708 216 aaPredicted RBP11.76□□□□□ -0.53
SNX1-201ENST00000261889 UPK3AO75631 287 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 MNDAP41218 407 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 ID4P47928 161 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 BAMBIQ13145 260 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 ALKBH1Q13686 389 aaKnown RBP11.76□□□□□ -0.53
SNX1-201ENST00000261889 ITPRIPL2Q3MIP1 535 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 ALG10Q5BKT4 473 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 STEAP1BQ6NZ63 245 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 SHISA6Q6ZSJ9 500 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 SLC36A1Q7Z2H8 476 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 OR2G2Q8NGZ5 317 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 TSNAXQ99598 290 aaKnown RBP11.76□□□□□ -0.53
SNX1-201ENST00000261889 TAS2R4Q9NYW5 299 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 SHPKQ9UHJ6 478 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 ZNF705EA8MWA4 302 aaPredicted RBP11.76□□□□□ -0.53
SNX1-201ENST00000261889 RAB3DO95716 219 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 OR4E1P0C645 316 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 MGAT2Q10469 447 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 GFOD2Q3B7J2 385 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 LY6G6FQ5SQ64 297 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 RAB12Q6IQ22 244 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 TFAP2EQ6VUC0 442 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 ZNF563Q8TA94 476 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 MAFIPQ8WZ33 124 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 CCDC74AQ96AQ1 378 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 CYB5R1Q9UHQ9 305 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 SLCO1B1Q9Y6L6 691 aa11.76□□□□□ -0.53
SNX1-201ENST00000261889 ZNF205O95201 554 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 ECDO95905 644 aaPredicted RBP11.75□□□□□ -0.53
SNX1-201ENST00000261889 THBS1P07996 1170 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 FGF2P09038 288 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 KCNJ3P48549 501 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 UBXN2BQ14CS0 331 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 TMEM71Q6P5X7 295 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 RNF113BQ8IZP6 322 aaKnown RBP11.75□□□□□ -0.53
SNX1-201ENST00000261889 OR5M9Q8NGP3 310 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 PPP1R1CQ8WVI7 109 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms