RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 EPXP11678 715 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 PRF1P14222 555 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 FUT4P22083 530 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 TRAM2Q15035 370 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 P2RY6Q15077 328 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 MS4A18Q3C1V0 323 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 FBXW9Q5XUX1 488 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 AAED1Q7RTV5 226 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 CADM3Q8N126 398 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 PFN4Q8NHR9 129 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 RPL3LQ92901 407 aaKnown RBP14.81□□□□□ -0.04
SDCBP-201ENST00000260130 UBE2FQ969M7 185 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 HDHD5Q9BXW7 423 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 MAN2C1Q9NTJ4 1040 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 PSORS1C1Q9UIG5 152 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 GPR52Q9Y2T5 361 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 SH3D21A4FU49 640 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 TNFRSF11BO00300 401 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 IGF2P01344 180 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 IGHV3-9P01782 118 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 ANXA8P13928 327 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 RHCEP18577 417 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 PSMB1P20618 241 aaKnown RBP14.8□□□□□ -0.04
SDCBP-201ENST00000260130 CCKARP32238 428 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 TEKQ02763 1124 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 ZNF404Q494X3 552 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 USP43Q70EL4 1123 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 CXorf67Q86X51 503 aaPredicted RBP14.8□□□□□ -0.04
SDCBP-201ENST00000260130 UBE2J2Q8N2K1 259 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 OR5J2Q8NH18 312 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 SP140LQ9H930 580 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 NMNAT1Q9HAN9 279 aaPredicted RBP14.8□□□□□ -0.04
SDCBP-201ENST00000260130 ZNF229Q9UJW7 825 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 A3GALT2U3KPV4 340 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 PLPP3O14495 311 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 ITGA2P17301 1181 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 SSTR2P30874 369 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 C1DQ13901 141 aaKnown RBP14.8□□□□□ -0.04
SDCBP-201ENST00000260130 TIGD6Q17RP2 521 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 SFRP5Q5T4F7 317 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 SNX29P2Q8IUI4 249 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 DEPDC4Q8N2C3 294 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 LRRC17Q8N6Y2 441 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 WFIKKN1Q96NZ8 548 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 POFUT2Q9Y2G5 429 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 LYVE1Q9Y5Y7 322 aa14.8□□□□□ -0.04
SDCBP-201ENST00000260130 ANKHD1Q8IWZ3 2542 aaKnown RBP14.79□□□□□ -0.04
SDCBP-201ENST00000260130 HIST1H2ABP04908 130 aa14.79□□□□□ -0.04
SDCBP-201ENST00000260130 CDK1P06493 297 aa14.79□□□□□ -0.04
SDCBP-201ENST00000260130 ASAH2BP0C7U1 165 aa14.79□□□□□ -0.04
SDCBP-201ENST00000260130 LIPAP38571 399 aa14.79□□□□□ -0.04
SDCBP-201ENST00000260130 PUDPQ08623 228 aa14.79□□□□□ -0.04
SDCBP-201ENST00000260130 ZNF181Q2M3W8 571 aa14.79□□□□□ -0.04
SDCBP-201ENST00000260130 HIST3H2AQ7L7L0 130 aa14.79□□□□□ -0.04
SDCBP-201ENST00000260130 SLC46A3Q7Z3Q1 461 aa14.79□□□□□ -0.04
SDCBP-201ENST00000260130 HIST1H2ACQ93077 130 aa14.79□□□□□ -0.04
SDCBP-201ENST00000260130 SGTBQ96EQ0 304 aa14.79□□□□□ -0.04
SDCBP-201ENST00000260130 FEVQ99581 238 aa14.79□□□□□ -0.04
SDCBP-201ENST00000260130 MED18Q9BUE0 208 aa14.79□□□□□ -0.04
SDCBP-201ENST00000260130 ANKRD19PQ9H560 264 aa14.79□□□□□ -0.04
SDCBP-201ENST00000260130 C20orf141Q9NUB4 165 aa14.79□□□□□ -0.04
SDCBP-201ENST00000260130 ASB6Q9NWX5 421 aa14.79□□□□□ -0.04
SDCBP-201ENST00000260130 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.79□□□□□ -0.04
SDCBP-201ENST00000260130 HTR3EA5X5Y0 456 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 UPK1BO75841 260 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 OR6A2O95222 327 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 ADORA3P0DMS8 318 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 FUT1P19526 365 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 AHCYP23526 432 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 CLDN17P56750 224 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 TLE4Q04727 773 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 UEVLDQ8IX04 471 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 OR10G2Q8NGC3 310 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 ACOT11Q8WXI4 607 aaPredicted RBP14.78□□□□□ -0.04
SDCBP-201ENST00000260130 KISS1RQ969F8 398 aaPredicted RBP14.78□□□□□ -0.04
SDCBP-201ENST00000260130 OR10A4Q9H209 315 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 FKBP14Q9NWM8 211 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 UPB1Q9UBR1 384 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 MALT1Q9UDY8 824 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 TESMINQ9Y4I5 508 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 NOX1Q9Y5S8 564 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 METTL15A6NJ78 407 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 OR7A10O76100 309 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 H1F0P07305 194 aaKnown RBP14.78□□□□□ -0.04
SDCBP-201ENST00000260130 HLA-DOBP13765 273 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 PPP3CBP16298 524 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 SELENOPP49908 381 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 LSM11P83369 360 aaKnown RBP eCLIP14.78□□□□□ -0.04
SDCBP-201ENST00000260130 FAPQ12884 760 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 DAZAP2Q15038 168 aaPredicted RBP14.78□□□□□ -0.04
SDCBP-201ENST00000260130 TSPO2Q5TGU0 170 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 NIPAL3Q6P499 406 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 PXKQ7Z7A4 578 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 RNF113BQ8IZP6 322 aaKnown RBP14.78□□□□□ -0.04
SDCBP-201ENST00000260130 STEAP2Q8NFT2 490 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 KBTBD8Q8NFY9 601 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 LIPHQ8WWY8 451 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 ACTR6Q9GZN1 396 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 SLCO5A1Q9H2Y9 848 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 SLC7A10Q9NS82 523 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms