RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 CDH10Q9Y6N8 788 aa12.57□□□□□ -0.4
SUPT4H1-201ENST00000225504 POLQO75417 2590 aa12.57□□□□□ -0.4
SUPT4H1-201ENST00000225504 PDZD2O15018 2839 aa12.57□□□□□ -0.4
SUPT4H1-201ENST00000225504 ARPC4-TTLL3A0A0A6YYG9 625 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 PRSS37A4D1T9 235 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 ARRDC5A6NEK1 342 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 ARPC3O15145 178 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 ENTPD5O75356 428 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 SCG5P05408 212 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 FASP25445 335 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 RPS6KA3P51812 740 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 UBE2NP61088 152 aaKnown RBP12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 GK3PQ14409 553 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 ZSCAN26Q16670 478 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 ZNF362Q5T0B9 420 aaPredicted RBP12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 THEM4Q5T1C6 240 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 C10orf128Q5T292 105 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 FAM205BPQ63HN1 556 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 GPR139Q6DWJ6 353 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 SHQ1Q6PI26 577 aaKnown RBP12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 CD300LDQ6UXZ3 194 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 SLC22A24Q8N4F4 322 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 OR4Q3Q8NH05 313 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 OR4K13Q8NH42 304 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 FOXN4Q96NZ1 517 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 RAB3IPQ96QF0 476 aaPredicted RBP12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 TMEM204Q9BSN7 226 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 TSSK6Q9BXA6 273 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 SEC61A2Q9H9S3 476 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 B3GNT2Q9NY97 397 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 STX18Q9P2W9 335 aaKnown RBP12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 ROS1P08922 2347 aa12.56□□□□□ -0.4
SUPT4H1-201ENST00000225504 NOTCH2Q04721 2471 aa12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 AKAP6Q13023 2319 aa12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 BHLHE40O14503 412 aa12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 XKRYO14609 159 aa12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 CELA3BP08861 270 aa12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 APEHP13798 732 aaKnown RBP12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 HOXB1P14653 301 aaPredicted RBP12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 HIST1H1CP16403 213 aaKnown RBP12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 GSTM3P21266 225 aa12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 DAPP51397 102 aa12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 SPOCK1Q08629 439 aa12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 OTPQ5XKR4 325 aa12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 MDP1Q86V88 176 aa12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 MYPOPQ86VE0 399 aaPredicted RBP12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 OR5K1Q8NHB7 308 aa12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 NRBF2Q96F24 287 aa12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 TSSK2Q96PF2 358 aa12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 NMNAT3Q96T66 252 aa12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 PKP2Q99959 881 aa12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 NDEL1Q9GZM8 345 aa12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 SYT4Q9H2B2 425 aa12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 SMURF2Q9HAU4 748 aa12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 NGBQ9NPG2 151 aa12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 SPG11Q96JI7 2443 aa12.55□□□□□ -0.4
SUPT4H1-201ENST00000225504 IGHV1-18A0A0C4DH31 117 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 DCTN6O00399 190 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 SLC16A7O60669 478 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 GOSR1O95249 250 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 WNT11O96014 354 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 CD3EP07766 207 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 OR8G3PP0DMU2 310 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 CD79AP11912 226 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 CTLA4P16410 223 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 CD40P25942 277 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 HOXC12P31275 282 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 CAPZA2P47755 286 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 ZNF84P51523 738 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 COX10Q12887 443 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 SGCAQ16586 387 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 SLC36A3Q495N2 470 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 FAHD1Q6P587 224 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 ZNF704Q6ZNC4 412 aaPredicted RBP12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 LRRC18Q8N456 261 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 IQCF1Q8N6M8 205 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 OR52E2Q8NGJ4 325 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 NABP1Q96AH0 204 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 ZNF75AQ96N20 296 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 DDOQ99489 341 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 BDH2Q9BUT1 245 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 NUAK2Q9H093 628 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 RERGLQ9H628 205 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 ESRP2Q9H6T0 727 aaKnown RBP12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 SRA1Q9HD15 236 aaKnown RBP12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 OBP2BQ9NPH6 170 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 TBC1D23Q9NUY8 699 aa12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 VSX1Q9NZR4 365 aaPredicted RBP12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 HEATR1Q9H583 2144 aaKnown RBP12.54□□□□□ -0.4
SUPT4H1-201ENST00000225504 OR6C68A6NDL8 312 aa12.53□□□□□ -0.4
SUPT4H1-201ENST00000225504 G3V2T6 193 aa12.53□□□□□ -0.4
SUPT4H1-201ENST00000225504 ABCD4O14678 606 aa12.53□□□□□ -0.4
SUPT4H1-201ENST00000225504 IDH3BO43837 385 aa12.53□□□□□ -0.4
SUPT4H1-201ENST00000225504 MITFO75030 526 aaPredicted RBP12.53□□□□□ -0.4
SUPT4H1-201ENST00000225504 MPZL1O95297 269 aa12.53□□□□□ -0.4
SUPT4H1-201ENST00000225504 GPANK1O95872 356 aa12.53□□□□□ -0.4
SUPT4H1-201ENST00000225504 ANXA8P13928 327 aa12.53□□□□□ -0.4
SUPT4H1-201ENST00000225504 CBR1P16152 277 aa12.53□□□□□ -0.4
SUPT4H1-201ENST00000225504 ARHGDIAP52565 204 aa12.53□□□□□ -0.4
SUPT4H1-201ENST00000225504 NR1H2P55055 460 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms