RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 IGHV2-5P01817 119 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 LCKP06239 509 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 MMP7P09237 267 aaPredicted RBP13.4□□□□□ -0.26
NME3-201ENST00000219302 ASAH2BP0C7U1 165 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 LIMS1P48059 325 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 MAGOHP61326 146 aaKnown RBP13.4□□□□□ -0.26
NME3-201ENST00000219302 TEKQ02763 1124 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 RUNDC3AQ59EK9 446 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 ENTPD8Q5MY95 495 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 TMEM53Q6P2H8 277 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 USP51Q70EK9 711 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 RBM45Q8IUH3 476 aaKnown RBP13.4□□□□□ -0.26
NME3-201ENST00000219302 ZDHHC22Q8N966 263 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 CPEB3Q8NE35 698 aaKnown RBP13.4□□□□□ -0.26
NME3-201ENST00000219302 OR4M2Q8NGB6 313 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 OR1J2Q8NGS2 313 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 MCHR2Q969V1 340 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 TLCD1Q96CP7 247 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 RAB39BQ96DA2 213 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 SEPHS2Q99611 448 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 EBF4Q9BQW3 602 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 CPPED1Q9BRF8 314 aaPredicted RBP13.4□□□□□ -0.26
NME3-201ENST00000219302 ZNF426Q9BUY5 554 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 MRPL13Q9BYD1 178 aaKnown RBP13.4□□□□□ -0.26
NME3-201ENST00000219302 BCL2L14Q9BZR8 327 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 NANSQ9NR45 359 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 NKIRAS1Q9NYS0 192 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 OPN4Q9UHM6 478 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 TRIM33Q9UPN9 1127 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 CORO2BQ9UQ03 480 aa13.4□□□□□ -0.26
NME3-201ENST00000219302 PKD1L1Q8TDX9 2849 aa13.39□□□□□ -0.27
NME3-201ENST00000219302 CPSF4LA6NMK7 179 aaKnown RBP13.39□□□□□ -0.27
NME3-201ENST00000219302 EVPLLA8MZ36 301 aa13.39□□□□□ -0.27
NME3-201ENST00000219302 TGDSO95455 350 aa13.39□□□□□ -0.27
NME3-201ENST00000219302 BCL10O95999 233 aa13.39□□□□□ -0.27
NME3-201ENST00000219302 FSHBP01225 129 aa13.39□□□□□ -0.27
NME3-201ENST00000219302 PTHP01270 115 aa13.39□□□□□ -0.27
NME3-201ENST00000219302 ADRA2CP18825 462 aa13.39□□□□□ -0.27
NME3-201ENST00000219302 ZNF133P52736 654 aaPredicted RBP13.39□□□□□ -0.27
NME3-201ENST00000219302 MOGQ16653 247 aa13.39□□□□□ -0.27
NME3-201ENST00000219302 TBC1D28Q2M2D7 210 aa13.39□□□□□ -0.27
NME3-201ENST00000219302 TUSC1Q2TAM9 212 aa13.39□□□□□ -0.27
NME3-201ENST00000219302 SLC36A2Q495M3 483 aa13.39□□□□□ -0.27
NME3-201ENST00000219302 TMEM255AQ5JRV8 349 aa13.39□□□□□ -0.27
NME3-201ENST00000219302 TTC33Q6PID6 262 aaPredicted RBP13.39□□□□□ -0.27
NME3-201ENST00000219302 SLC16A14Q7RTX9 510 aa13.39□□□□□ -0.27
NME3-201ENST00000219302 NANPQ8TBE9 248 aa13.39□□□□□ -0.27
NME3-201ENST00000219302 ADAMTS16Q8TE57 1224 aa13.39□□□□□ -0.27
NME3-201ENST00000219302 SNX33Q8WV41 574 aa13.39□□□□□ -0.27
NME3-201ENST00000219302 C7orf26Q96N11 449 aa13.39□□□□□ -0.27
NME3-201ENST00000219302 ZNF347Q96SE7 839 aa13.39□□□□□ -0.27
NME3-201ENST00000219302 CCDC28BQ9BUN5 200 aa13.39□□□□□ -0.27
NME3-201ENST00000219302 SUCNR1Q9BXA5 334 aa13.39□□□□□ -0.27
NME3-201ENST00000219302 ZNF229Q9UJW7 825 aa13.39□□□□□ -0.27
NME3-201ENST00000219302 ANGPT4Q9Y264 503 aa13.39□□□□□ -0.27
NME3-201ENST00000219302 CLDN25C9JDP6 229 aa13.38□□□□□ -0.27
NME3-201ENST00000219302 POLR3GO15318 223 aaPredicted RBP13.38□□□□□ -0.27
NME3-201ENST00000219302 KCNAB3O43448 404 aa13.38□□□□□ -0.27
NME3-201ENST00000219302 MGRN1O60291 552 aa13.38□□□□□ -0.27
NME3-201ENST00000219302 IGHG1P01857 330 aa13.38□□□□□ -0.27
NME3-201ENST00000219302 OPN1SWP03999 348 aa13.38□□□□□ -0.27
NME3-201ENST00000219302 MMP15P51511 669 aa13.38□□□□□ -0.27
NME3-201ENST00000219302 AWAT1Q58HT5 328 aa13.38□□□□□ -0.27
NME3-201ENST00000219302 DCAF12L2Q5VW00 463 aa13.38□□□□□ -0.27
NME3-201ENST00000219302 C11orf65Q8NCR3 313 aa13.38□□□□□ -0.27
NME3-201ENST00000219302 RBM15BQ8NDT2 890 aaKnown RBP13.38□□□□□ -0.27
NME3-201ENST00000219302 SLC6A7Q99884 636 aa13.38□□□□□ -0.27
NME3-201ENST00000219302 PRSS27Q9BQR3 290 aa13.38□□□□□ -0.27
NME3-201ENST00000219302 SLC19A3Q9BZV2 496 aa13.38□□□□□ -0.27
NME3-201ENST00000219302 PCDHAC1Q9H158 963 aa13.38□□□□□ -0.27
NME3-201ENST00000219302 LRMDAQ9H2I8 198 aa13.38□□□□□ -0.27
NME3-201ENST00000219302 MEPEQ9NQ76 525 aaPredicted RBP13.38□□□□□ -0.27
NME3-201ENST00000219302 DECR2Q9NUI1 292 aa13.38□□□□□ -0.27
NME3-201ENST00000219302 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.38□□□□□ -0.27
NME3-201ENST00000219302 SLC7A7Q9UM01 511 aa13.38□□□□□ -0.27
NME3-201ENST00000219302 IQCMA0A1B0GVH7 501 aa13.37□□□□□ -0.27
NME3-201ENST00000219302 TRAPPC13A5PLN9 417 aa13.37□□□□□ -0.27
NME3-201ENST00000219302 IGHV1-46P01743 117 aa13.37□□□□□ -0.27
NME3-201ENST00000219302 HIST1H2ABP04908 130 aa13.37□□□□□ -0.27
NME3-201ENST00000219302 MAKP20794 623 aa13.37□□□□□ -0.27
NME3-201ENST00000219302 CD247P20963 164 aa13.37□□□□□ -0.27
NME3-201ENST00000219302 GATA3P23771 443 aa13.37□□□□□ -0.27
NME3-201ENST00000219302 PLP2Q04941 152 aa13.37□□□□□ -0.27
NME3-201ENST00000219302 TSTQ16762 297 aaKnown RBP13.37□□□□□ -0.27
NME3-201ENST00000219302 HFEQ30201 348 aa13.37□□□□□ -0.27
NME3-201ENST00000219302 AGKQ53H12 422 aa13.37□□□□□ -0.27
NME3-201ENST00000219302 HIST3H2AQ7L7L0 130 aa13.37□□□□□ -0.27
NME3-201ENST00000219302 LRRC18Q8N456 261 aa13.37□□□□□ -0.27
NME3-201ENST00000219302 OR1J1Q8NGS3 322 aa13.37□□□□□ -0.27
NME3-201ENST00000219302 RAB1CQ92928 201 aa13.37□□□□□ -0.27
NME3-201ENST00000219302 DVL3Q92997 716 aaPredicted RBP13.37□□□□□ -0.27
NME3-201ENST00000219302 HIST1H2ACQ93077 130 aa13.37□□□□□ -0.27
NME3-201ENST00000219302 MARS2Q96GW9 593 aaKnown RBP13.37□□□□□ -0.27
NME3-201ENST00000219302 MPP4Q96JB8 637 aa13.37□□□□□ -0.27
NME3-201ENST00000219302 POM121L2Q96KW2 1035 aa13.37□□□□□ -0.27
NME3-201ENST00000219302 C7orf69Q9H7B7 122 aa13.37□□□□□ -0.27
NME3-201ENST00000219302 SAP30LQ9HAJ7 183 aa13.37□□□□□ -0.27
NME3-201ENST00000219302 TMBIM4Q9HC24 238 aa13.37□□□□□ -0.27
NME3-201ENST00000219302 CENPBD1B2RD01 187 aa13.36□□□□□ -0.27
NME3-201ENST00000219302 KPNA4O00629 521 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms