RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 KCTD20Q7Z5Y7 419 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 RBPMSQ93062 196 aaKnown RBP13.66□□□□□ -0.22
EFNB1-201ENST00000204961 AIPO00170 330 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 CREBL2O60519 120 aaPredicted RBP13.66□□□□□ -0.22
EFNB1-201ENST00000204961 DPP4P27487 766 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 PRKXP51817 358 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 WDR38Q5JTN6 314 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 GLYATL3Q5SZD4 288 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 LINC01590Q5TEZ4 76 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 CD276Q5ZPR3 534 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 TMEM81Q6P7N7 255 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 DPY19L2P2Q6ZN68 376 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 TOR1AIP2Q8NFQ8 470 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 OR2G2Q8NGZ5 317 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 ADAMTS18Q8TE60 1221 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 WNT2BQ93097 391 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 PDCD10Q9BUL8 212 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 LRRC61Q9BV99 259 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 COMMD4Q9H0A8 199 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 HEXA-AS1Q9H8Q6 139 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 SEC61A2Q9H9S3 476 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 EMC9Q9Y3B6 208 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 A0A087WV62 115 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 TMEM235A6NFC5 223 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 OGG1O15527 345 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 ITGA5P08648 1049 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 ACHEP22303 614 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 OR1D5P58170 312 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 Q499Y3 187 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 SLC22A10Q63ZE4 541 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 GPAT4Q86UL3 456 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 FOXRED2Q8IWF2 684 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 CTHRC1Q96CG8 243 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 TINAGL1Q9GZM7 467 aaPredicted RBP13.66□□□□□ -0.22
EFNB1-201ENST00000204961 CA14Q9ULX7 337 aa13.66□□□□□ -0.22
EFNB1-201ENST00000204961 TEX51A0A1B0GUA7 166 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 LINC00862A6NCI5 91 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 ZNF264O43296 627 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 SC5DO75845 299 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 BDH1Q02338 343 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 TAF13Q15543 124 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 ZNF74Q16587 644 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 AKIRIN2Q53H80 203 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 UBL7Q96S82 380 aaPredicted RBP13.65□□□□□ -0.22
EFNB1-201ENST00000204961 MMP25Q9NPA2 562 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 TAS2R4Q9NYW5 299 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 COA3Q9Y2R0 106 aaPredicted RBP13.65□□□□□ -0.22
EFNB1-201ENST00000204961 MAB21L2Q9Y586 359 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 RALGAPA1Q6GYQ0 2036 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 C7orf66A4D0T2 115 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 APOC3P02656 99 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 IGHV4-34P06331 123 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 ACSM4P0C7M7 580 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 PI3P19957 117 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 VAMP1P23763 118 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 SKP1P63208 163 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 MFGE8Q08431 387 aaPredicted RBP13.65□□□□□ -0.22
EFNB1-201ENST00000204961 INPP5JQ15735 1006 aaPredicted RBP13.65□□□□□ -0.22
EFNB1-201ENST00000204961 TUSC1Q2TAM9 212 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 C2orf76Q3KRA6 126 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 OR52W1Q6IF63 320 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 DND1Q8IYX4 353 aaKnown RBP13.65□□□□□ -0.22
EFNB1-201ENST00000204961 ESX1Q8N693 406 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 ST8SIA4Q92187 359 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 G6PC3Q9BUM1 346 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 SARGQ9BW04 601 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 EMC7Q9NPA0 242 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 NBEAQ8NFP9 2946 aa13.65□□□□□ -0.22
EFNB1-201ENST00000204961 MEIKINA0A087WXM9 373 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 RENP00797 406 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 AMY2AP04746 511 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 AKR1D1P51857 326 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 FOXK1P85037 733 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 ACKR1Q16570 336 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 PRSS42Q7Z5A4 293 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 SLC35F3Q8IY50 421 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 MUC20Q8N307 709 aaPredicted RBP13.64□□□□□ -0.23
EFNB1-201ENST00000204961 ELSPBP1Q96BH3 223 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 C5orf34Q96MH7 638 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 INTS14Q96SY0 518 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 SCP2D1Q9UJQ7 156 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 DENND4AQ7Z401 1863 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 RPS10-NUDT3A0A1W2PQS6 291 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 PRR19A6NJB7 356 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 ALOX12BO75342 701 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 SULT1A3P0DMM9 295 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 SULT1A4P0DMN0 295 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 CTLA4P16410 223 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 ZNF117Q03924 483 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 POU4F2Q12837 409 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 CCDC157Q569K6 752 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 GPR139Q6DWJ6 353 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 PRSS35Q8N3Z0 413 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 GVQW1Q8N7I0 195 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 INPP5EQ9NRR6 644 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 PI4KAP42356 2102 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 UBE2QL1A1L167 161 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 FAM221BA6H8Z2 402 aa13.64□□□□□ -0.23
EFNB1-201ENST00000204961 C5orf67F2Z3F1 127 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms