RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Vmn1r228Q8R2A7 333 aa8.94□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Olfr799Q8VGI7 311 aa8.94□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Adarb1Q91ZS8 711 aaKnown RBP8.94□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Raf1Q99N57 648 aa8.94□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Q9CQT6 229 aa8.94□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Kiaa0141Q9DCV6 510 aa8.94□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Isyna1Q9JHU9 557 aa8.94□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 CorinQ9Z319 1113 aa8.94□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Gm4779A0A1B0GR91 561 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Olfr110A2RT31 317 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Vmn2r49D3Z6L3 852 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Zfp605E9QAH2 694 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Speer4eK7N6S8 255 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Bcl2l11O54918 196 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Sp3O70494 783 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Prkar1bP12849 381 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Klhl8P59280 629 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Ppp1caP62137 330 aaKnown RBP8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 McptlQ00356 246 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Ccdc69Q3TCJ8 202 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Olfr332Q5NC45 344 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Tas2r40Q7TQB8 319 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Olfr111Q7TRK1 317 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Vrk1Q80X41 440 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Ablim2Q8BL65 612 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Wdfy2Q8BUB4 400 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Gpr61Q8C010 449 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Peli1Q8C669 418 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 SinhcafQ8C8M1 221 aaKnown RBP8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 GmdsQ8K0C9 372 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Slc25a42Q8R0Y8 318 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Ttc36Q8VBW8 186 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Arfgap1Q9EPJ9 414 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Clec3aQ9EPW4 196 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Oasl2Q9Z2F2 508 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Skint8A7XV07 398 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Saxo1B1AXP3 476 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Zfp619G3X9T2 1161 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Vmn2r89O35199 507 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Camk2aP11798 478 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Lefty2P57785 368 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Btg1P62325 171 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Nos3P70313 1202 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Perm1Q149B8 807 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Slc30a2Q2HJ10 371 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Slc38a8Q5HZH7 432 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Mettl7a2Q5I0W6 244 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Tex261Q62302 196 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Rft1Q8C3B8 541 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Prps1l1Q8C5R8 318 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Serinc2Q8K0E7 450 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Actl11Q9D5V1 1207 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Jmjd6Q9ERI5 403 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Dnajb8Q9QYI7 227 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Bmp10Q9R229 421 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 H2afb3S4R1G7 115 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Pi4kaE9Q3L2 2105 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Trbv2A0A0B4J1G8 114 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 AI182371A2AS37 356 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Rd3lB2RV38 197 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Sult6b2B7ZWN4 290 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Gm5286E0CXI6 357 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Slc38a6G3UVW3 457 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Ntn1O09118 604 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 MpoP11247 718 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Fcer1aP20489 250 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Mapk14P47811 360 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Wnt11P48615 354 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 P58686 83 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Tcfl5Q32NY8 489 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 4930438A08RikQ5SPH3 536 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Klhl9Q6ZPT1 617 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Tas2r136Q7TQA8 305 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Olfr1031Q7TR87 336 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Sec22aQ8BH47 307 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Znf775Q8BI73 538 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Olfr229Q8VFN5 307 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Acss1Q99NB1 682 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Mtif3Q9CZD5 276 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 RgccQ9DBX1 137 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 BvesQ9ES83 358 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 FastkQ9JIX9 511 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Sec61a2Q9JLR1 476 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Dok3Q9QZK7 444 aa8.93□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Kif26bQ7TNC6 2112 aa8.92□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Vmn1r177E9PXM3 309 aa8.92□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Olfr68E9PYY2 315 aa8.92□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Spsb2O88838 264 aa8.92□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 SparcP07214 302 aa8.92□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 LhcgrP30730 700 aa8.92□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Cdk5r1P61809 307 aa8.92□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 NrtnP97463 195 aa8.92□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 XkrxQ5GH68 449 aa8.92□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Olfr1133Q7TR44 313 aa8.92□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Olfr843Q7TRG4 313 aa8.92□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Coro2bQ8BH44 480 aa8.92□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Rcc2Q8BK67 520 aaKnown RBP8.92□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Gm9938Q8C3P5 112 aa8.92□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Mtnr1bQ8CIQ6 364 aa8.92□□□□□ -0.98
Pcdh1-201ENSMUST00000057185 Olfr780Q8VEU0 312 aa8.92□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 45.2 ms