RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 OR1J1Q8NGS3 322 aa17.97■□□□□ 0.47
CACNA1A-257ENST00000638009 OR2AE1Q8NHA4 323 aa17.97■□□□□ 0.47
CACNA1A-257ENST00000638009 TFAP2CQ92754 450 aa17.97■□□□□ 0.47
CACNA1A-257ENST00000638009 OXA1LQ15070 435 aa17.97■□□□□ 0.47
CACNA1A-257ENST00000638009 CPZQ66K79 652 aa17.97■□□□□ 0.47
CACNA1A-257ENST00000638009 GABARAPL1Q9H0R8 117 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 MED16Q9Y2X0 877 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 C17orf105B2RV13 164 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 SDHDO14521 159 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 EIF1BO60739 113 aaKnown RBP17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 LEFTY1O75610 366 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 BLVRBP30043 206 aaPredicted RBP17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 IDUAP35475 653 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 CLEC9AQ6UXN8 241 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 C15orf52Q6ZUT6 534 aaKnown RBP17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 SMIM7Q9BQ49 75 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 DPH2Q9BQC3 489 aaPredicted RBP17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 PARD6AQ9NPB6 346 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 TMEM59LQ9UK28 342 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 RGNQ15493 299 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 ECM1Q16610 540 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 C18orf63Q68DL7 685 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 ZNF256Q9Y2P7 627 aaPredicted RBP17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 NHLH1Q02575 133 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 NHLH2Q02577 135 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 CYS1Q717R9 158 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 PINX1Q96BK5 328 aaKnown RBP17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 SH3BGRL2Q9UJC5 107 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 FEZF1A0PJY2 475 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 SLC22A20A6NK97 555 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 ZFAND5O76080 213 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 CR2P20023 1033 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 TBC1D28Q2M2D7 210 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 SOWAHAQ2M3V2 549 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 ATP5SQ99766 215 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 GALR2O43603 387 aaPredicted RBP17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 APEX1P27695 318 aaKnown RBP17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 DOC2AQ14183 400 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 NLGN4XQ8N0W4 816 aa17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 BCL2L2Q92843 193 aaPredicted RBP17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 SDR39U1Q9NRG7 319 aaPredicted RBP17.96■□□□□ 0.47
CACNA1A-257ENST00000638009 FABP9Q0Z7S8 132 aa17.96■□□□□ 0.46
CACNA1A-257ENST00000638009 ETFRF1Q6IPR1 90 aa17.96■□□□□ 0.46
CACNA1A-257ENST00000638009 FAM57BQ71RH2 274 aa17.96■□□□□ 0.46
CACNA1A-257ENST00000638009 ZNF534Q76KX8 674 aa17.96■□□□□ 0.46
CACNA1A-257ENST00000638009 SLC46A1Q96NT5 459 aa17.96■□□□□ 0.46
CACNA1A-257ENST00000638009 GPR171O14626 319 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 OR13C7P0DN81 318 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 TAL1P17542 331 aaPredicted RBP17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 GDNFP39905 211 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 PRICKLE3O43900 615 aaPredicted RBP17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 CHRM2P08172 466 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 GPR12P47775 334 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 DCAF12L1Q5VU92 463 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 COMMD1Q8N668 190 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 TNFSF8P32971 234 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 PDZD11Q5EBL8 140 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 STACQ99469 402 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 MTNR1BP49286 362 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 C14orf80Q86SX3 495 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 ACVR1CQ8NER5 493 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 KHSRPQ92945 711 aaKnown RBP eCLIP17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 CD1EP15812 388 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 ETV3P41162 512 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 SSBP1Q04837 148 aaKnown RBP17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 THEM4Q5T1C6 240 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 ZPBPQ9BS86 351 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 ARNTP27540 789 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 NCR3LG1Q68D85 454 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 TMUB2Q71RG4 321 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 DYNC2LI1Q8TCX1 351 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 ZDHHC5Q9C0B5 715 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 ADGRB2O60241 1585 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 SCN11AQ9UI33 1791 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 FCGR2AP12318 317 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 BMP1P13497 986 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 NKX2-1P43699 371 aaPredicted RBP17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 SIM1P81133 766 aaPredicted RBP17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 CORO6Q6QEF8 472 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 C7orf43Q8WVR3 580 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 NECTIN4Q96NY8 510 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 MACROD1Q9BQ69 325 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 JAM3Q9BX67 310 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 NKX2-4Q9H2Z4 354 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 SIX2Q9NPC8 291 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 PADI1Q9ULC6 663 aa17.95■□□□□ 0.46
CACNA1A-257ENST00000638009 BMPR1BO00238 502 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 DEGS1O15121 323 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 RNGTTO60942 597 aaKnown RBP17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 BMPR1AP36894 532 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 ZFYVE21Q9BQ24 234 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 GSX2Q9BZM3 304 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 OR51B6Q9H340 312 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 WNK1Q9H4A3 2382 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 TCRBV7S3A2A0A539 114 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 DDNO94850 711 aaPredicted RBP17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 GM2AP17900 193 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 Q499Y3 187 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 WDR73Q6P4I2 378 aa17.94■□□□□ 0.46
CACNA1A-257ENST00000638009 AP5S1Q9NUS5 200 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms