RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 HIPK1Q86Z02 1210 aa12.96□□□□□ -0.33
CACNA1A-230ENST00000636768 SKA3Q8IX90 412 aa12.96□□□□□ -0.33
CACNA1A-230ENST00000636768 CDK20Q8IZL9 346 aa12.96□□□□□ -0.33
CACNA1A-230ENST00000636768 NOXO1Q8NFA2 376 aa12.96□□□□□ -0.33
CACNA1A-230ENST00000636768 RP9Q8TA86 221 aaKnown RBP12.96□□□□□ -0.33
CACNA1A-230ENST00000636768 NEU4Q8WWR8 484 aaPredicted RBP12.96□□□□□ -0.33
CACNA1A-230ENST00000636768 PRRC1Q96M27 445 aa12.96□□□□□ -0.33
CACNA1A-230ENST00000636768 ZNF75AQ96N20 296 aa12.96□□□□□ -0.33
CACNA1A-230ENST00000636768 FOXN4Q96NZ1 517 aa12.96□□□□□ -0.33
CACNA1A-230ENST00000636768 KCNK17Q96T54 332 aa12.96□□□□□ -0.33
CACNA1A-230ENST00000636768 DOK1Q99704 481 aa12.96□□□□□ -0.33
CACNA1A-230ENST00000636768 SH3GL3Q99963 347 aa12.96□□□□□ -0.33
CACNA1A-230ENST00000636768 RNF121Q9H920 327 aa12.96□□□□□ -0.33
CACNA1A-230ENST00000636768 MED4Q9NPJ6 270 aa12.96□□□□□ -0.33
CACNA1A-230ENST00000636768 C20orf141Q9NUB4 165 aa12.96□□□□□ -0.33
CACNA1A-230ENST00000636768 AP3M1Q9Y2T2 418 aa12.96□□□□□ -0.33
CACNA1A-230ENST00000636768 TMEM129A0AVI4 362 aa12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 VWC2LB2RUY7 222 aa12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 CCDC22O60826 627 aa12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 IGF2P01344 180 aa12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 ADRA2AP08913 450 aa12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 IGHV4-31P0DP07 118 aa12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 COX4I1P13073 169 aa12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 ZNF35P13682 527 aa12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 APEHP13798 732 aaKnown RBP12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 DAOP14920 347 aa12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 MDH1P40925 334 aaKnown RBP12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 GZMKP49863 264 aa12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 SELENOWP63302 87 aa12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 MYBPC1Q00872 1141 aa12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 ST3GAL3Q11203 375 aa12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 TMEM53Q6P2H8 277 aa12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 ZCCHC24Q8N2G6 241 aaKnown RBP12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 SYT14Q8NB59 555 aa12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 ZNF540Q8NDQ6 660 aa12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 OR4K5Q8NGD3 323 aa12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 FGFBP3Q8TAT2 258 aa12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 MCHR2Q969V1 340 aa12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 MRPL24Q96A35 216 aaKnown RBP12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 ZNF347Q96SE7 839 aa12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 CMTM6Q9NX76 183 aa12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 STX18Q9P2W9 335 aaKnown RBP12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 HEATR1Q9H583 2144 aaKnown RBP12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 ABCA1O95477 2261 aa12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 CR1P17927 2039 aa12.95□□□□□ -0.34
CACNA1A-230ENST00000636768 M0R233 179 aa12.94□□□□□ -0.34
CACNA1A-230ENST00000636768 GSTA4O15217 222 aa12.94□□□□□ -0.34
CACNA1A-230ENST00000636768 PIP5K1CO60331 668 aa12.94□□□□□ -0.34
CACNA1A-230ENST00000636768 ZNF682O95780 498 aa12.94□□□□□ -0.34
CACNA1A-230ENST00000636768 IFNA2P01563 188 aa12.94□□□□□ -0.34
CACNA1A-230ENST00000636768 SERPINA5P05154 406 aa12.94□□□□□ -0.34
CACNA1A-230ENST00000636768 GLRXP35754 106 aa12.94□□□□□ -0.34
CACNA1A-230ENST00000636768 LIPEQ05469 1076 aa12.94□□□□□ -0.34
CACNA1A-230ENST00000636768 RUNX1T1Q06455 604 aa12.94□□□□□ -0.34
CACNA1A-230ENST00000636768 SLC36A2Q495M3 483 aa12.94□□□□□ -0.34
CACNA1A-230ENST00000636768 SLC16A14Q7RTX9 510 aa12.94□□□□□ -0.34
CACNA1A-230ENST00000636768 DPPA2Q7Z7J5 298 aa12.94□□□□□ -0.34
CACNA1A-230ENST00000636768 SLC30A7Q8NEW0 376 aa12.94□□□□□ -0.34
CACNA1A-230ENST00000636768 MOSPD2Q8NHP6 518 aa12.94□□□□□ -0.34
CACNA1A-230ENST00000636768 ASB10Q8WXI3 467 aa12.94□□□□□ -0.34
CACNA1A-230ENST00000636768 MDFIQ99750 246 aa12.94□□□□□ -0.34
CACNA1A-230ENST00000636768 SYT3Q9BQG1 590 aa12.94□□□□□ -0.34
CACNA1A-230ENST00000636768 MRPL37Q9BZE1 423 aaKnown RBP12.94□□□□□ -0.34
CACNA1A-230ENST00000636768 BPESC1Q9GZL8 116 aa12.94□□□□□ -0.34
CACNA1A-230ENST00000636768 TPK1Q9H3S4 243 aa12.94□□□□□ -0.34
CACNA1A-230ENST00000636768 GMPR2Q9P2T1 348 aaKnown RBP12.94□□□□□ -0.34
CACNA1A-230ENST00000636768 SLC7A8Q9UHI5 535 aa12.94□□□□□ -0.34
CACNA1A-230ENST00000636768 CDC42EP3Q9UKI2 254 aa12.94□□□□□ -0.34
CACNA1A-230ENST00000636768 IGHV4-61A0A0C4DH41 118 aa12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 CENPBD1B2RD01 187 aa12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 SYNGR3O43761 229 aa12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 TRMUO75648 421 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 STAMBPO95630 424 aa12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 IFNW1P05000 195 aa12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 IFI30P13284 250 aa12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 ACADSP16219 412 aa12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 YAP1P46937 504 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 EVX1P49640 407 aa12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 SLC7A2P52569 658 aa12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 TOP3AQ13472 1001 aaPredicted RBP12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 HIST3H3Q16695 136 aa12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 MSMPQ1L6U9 139 aa12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 VTCN1Q7Z7D3 282 aa12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 ZNF584Q8IVC4 421 aa12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 SLC15A3Q8IY34 581 aa12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 LIPHQ8WWY8 451 aa12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 BPIFA2Q96DR5 249 aa12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 FNDC11Q9BVV2 318 aa12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 MRPL13Q9BYD1 178 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 C1orf198Q9H425 327 aa12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 CDH20Q9HBT6 801 aa12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 REV1Q9UBZ9 1251 aa12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 FZR1Q9UM11 496 aa12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 A4GNTQ9UNA3 340 aa12.93□□□□□ -0.34
CACNA1A-230ENST00000636768 LOC100289279A0A1B0GTE1 492 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 A0A1W2PPW3 197 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 CXCR6O00574 342 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 SLC2A10O95528 541 aa12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 SAGP10523 405 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-230ENST00000636768 NR2C1P13056 603 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms