RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 TACSTD2P09758 323 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 PRPS1P60891 318 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 TMEM65Q6PI78 240 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 GLDNQ6ZMI3 551 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 HGDQ93099 445 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 HAVCR1Q96D42 359 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 DHRS9Q9BPW9 319 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 GSX2Q9BZM3 304 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 ATG5Q9H1Y0 275 aa12.72□□□□□ -0.37
CACNA1A-228ENST00000636610 IGHV5-51A0A0C4DH38 117 aa12.71□□□□□ -0.37
CACNA1A-228ENST00000636610 ANKRD20A5PA0PJZ0 165 aa12.71□□□□□ -0.37
CACNA1A-228ENST00000636610 EFCAB7A8K855 629 aa12.71□□□□□ -0.37
CACNA1A-228ENST00000636610 GSTZ1O43708 216 aaPredicted RBP12.71□□□□□ -0.37
CACNA1A-228ENST00000636610 GPRIN2O60269 458 aa12.71□□□□□ -0.37
CACNA1A-228ENST00000636610 SLC16A7O60669 478 aa12.71□□□□□ -0.37
CACNA1A-228ENST00000636610 PPM1BO75688 479 aa12.71□□□□□ -0.37
CACNA1A-228ENST00000636610 UTS2O95399 124 aa12.71□□□□□ -0.37
CACNA1A-228ENST00000636610 IGHV4-34P06331 123 aa12.71□□□□□ -0.37
CACNA1A-228ENST00000636610 EIF1AXP47813 144 aaKnown RBP12.71□□□□□ -0.37
CACNA1A-228ENST00000636610 BTN1A1Q13410 526 aa12.71□□□□□ -0.37
CACNA1A-228ENST00000636610 FZD2Q14332 565 aa12.71□□□□□ -0.37
CACNA1A-228ENST00000636610 GGTLC2Q14390 218 aa12.71□□□□□ -0.37
CACNA1A-228ENST00000636610 NKPD1Q17RQ9 610 aa12.71□□□□□ -0.37
CACNA1A-228ENST00000636610 WDR38Q5JTN6 314 aa12.71□□□□□ -0.37
CACNA1A-228ENST00000636610 C1orf189Q5VU69 101 aa12.71□□□□□ -0.37
CACNA1A-228ENST00000636610 ANGPTL6Q8NI99 470 aa12.71□□□□□ -0.37
CACNA1A-228ENST00000636610 DUSP19Q8WTR2 217 aa12.71□□□□□ -0.37
CACNA1A-228ENST00000636610 LINC00052Q96N35 136 aa12.71□□□□□ -0.37
CACNA1A-228ENST00000636610 PTDSS2Q9BVG9 487 aa12.71□□□□□ -0.37
CACNA1A-228ENST00000636610 SEMA6CQ9H3T2 930 aa12.71□□□□□ -0.37
CACNA1A-228ENST00000636610 ZCCHC4Q9H5U6 513 aa12.71□□□□□ -0.37
CACNA1A-228ENST00000636610 FBXL2Q9UKC9 423 aa12.71□□□□□ -0.37
CACNA1A-228ENST00000636610 LINC00862A6NCI5 91 aa12.71□□□□□ -0.38
CACNA1A-228ENST00000636610 ARPC3O15145 178 aa12.71□□□□□ -0.38
CACNA1A-228ENST00000636610 OR6A2O95222 327 aa12.71□□□□□ -0.38
CACNA1A-228ENST00000636610 PNPP00491 289 aa12.71□□□□□ -0.38
CACNA1A-228ENST00000636610 NFYAP23511 347 aaPredicted RBP12.71□□□□□ -0.38
CACNA1A-228ENST00000636610 SDHAP31040 664 aa12.71□□□□□ -0.38
CACNA1A-228ENST00000636610 FNTBP49356 437 aa12.71□□□□□ -0.38
CACNA1A-228ENST00000636610 MAP2K6P52564 334 aa12.71□□□□□ -0.38
CACNA1A-228ENST00000636610 AP3S2P59780 193 aa12.71□□□□□ -0.38
CACNA1A-228ENST00000636610 VWA2Q5GFL6 755 aa12.71□□□□□ -0.38
CACNA1A-228ENST00000636610 ARHGAP40Q5TG30 622 aa12.71□□□□□ -0.38
CACNA1A-228ENST00000636610 LIN54Q6MZP7 749 aa12.71□□□□□ -0.38
CACNA1A-228ENST00000636610 TMEM184AQ6ZMB5 413 aa12.71□□□□□ -0.38
CACNA1A-228ENST00000636610 C3P1Q6ZMU1 363 aa12.71□□□□□ -0.38
CACNA1A-228ENST00000636610 SLC16A9Q7RTY1 509 aa12.71□□□□□ -0.38
CACNA1A-228ENST00000636610 FAM122BQ7Z309 247 aa12.71□□□□□ -0.38
CACNA1A-228ENST00000636610 RELL2Q8NC24 303 aaPredicted RBP12.71□□□□□ -0.38
CACNA1A-228ENST00000636610 GPBAR1Q8TDU6 330 aa12.71□□□□□ -0.38
CACNA1A-228ENST00000636610 MNTQ99583 582 aa12.71□□□□□ -0.38
CACNA1A-228ENST00000636610 ZNF230Q9UIE0 474 aaPredicted RBP12.71□□□□□ -0.38
CACNA1A-228ENST00000636610 CD207Q9UJ71 328 aa12.71□□□□□ -0.38
CACNA1A-228ENST00000636610 FBXO4Q9UKT5 387 aa12.71□□□□□ -0.38
CACNA1A-228ENST00000636610 POMT2Q9UKY4 750 aa12.71□□□□□ -0.38
CACNA1A-228ENST00000636610 SDK2Q58EX2 2172 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 LOC105371267A0A1B0GV96 52 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 ACOT7O00154 380 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 NR0B1P51843 470 aaKnown RBP12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 SPOCK1Q08629 439 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 DEFB133Q30KQ1 61 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 SCGB2B2Q4G0G5 96 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 FAM69AQ5T7M9 428 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 WBP2NLQ6ICG8 309 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 MUC20Q8N307 709 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 MIB2Q96AX9 1013 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 PRDM9Q9NQV7 894 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 B9D1Q9UPM9 204 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 IGHV3-20A0A0C4DH32 117 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 OR4C45A6NMZ5 311 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 H0YIG0 161 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 ZNF264O43296 627 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 LMX1BO60663 402 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 ACSM4P0C7M7 580 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 PRKACBP22694 351 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 CXCR1P25024 350 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 SORDQ00796 357 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 CSRP2Q16527 193 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 KLHL26Q53HC5 615 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 HACD4Q5VWC8 232 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 ATG4DQ86TL0 474 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 LRRTM1Q86UE6 522 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 LINC00346Q8IVM7 164 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 OR51A2Q8NGJ7 313 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 METTL21AQ8WXB1 218 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 SLC38A3Q99624 504 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 COMMD4Q9H0A8 199 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 EXO5Q9H790 373 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 FITM1A5D6W6 292 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 SOX1O00570 391 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 XKRYO14609 159 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 KCNAB3O43448 404 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 ECDO95905 644 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 CD1CP29017 333 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 KIR3DL2P43630 455 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 RPS4XP62701 263 aaKnown RBP12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 C2orf76Q3KRA6 126 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 FAM74A1Q5RGS3 127 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 ZNF684Q5T5D7 378 aa12.7□□□□□ -0.38
CACNA1A-228ENST00000636610 CORO6Q6QEF8 472 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms