RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 TMED4Q7Z7H5 227 aa13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 SPAG16Q8N0X2 631 aa13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 DVL3Q92997 716 aaPredicted RBP13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 WDR13Q9H1Z4 485 aa13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 GAREM1Q9H706 876 aa13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 CAPN10Q9HC96 672 aa13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 TMEM74BQ9NUR3 256 aa13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 THAP10Q9P2Z0 257 aaPredicted RBP13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 MEIS3P1A6NDR6 274 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 NUDT19A8MXV4 375 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 H0YC42 278 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 CTSVO60911 334 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 SDHAP31040 664 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 FGL2Q14314 439 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 CST6Q15828 149 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 ARHGAP40Q5TG30 622 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 LURAP1LQ8IV03 231 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 SFTPA1Q8IWL2 248 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 DCBLD2Q96PD2 775 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 FAM117AQ9C073 453 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 ATG5Q9H1Y0 275 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 WDR76Q9H967 626 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 BIN3Q9NQY0 253 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 HIF3AQ9Y2N7 669 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 HTTP42858 3142 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 LTBP2Q14767 1821 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 PQLC2LA1A4F0 135 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 SIGLEC5O15389 551 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 SLC35E2P0CK97 266 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 HLA-GP17693 338 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 PVALBP20472 110 aaPredicted RBP13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 DLSTP36957 453 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 RAB13P51153 203 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 ARHGDIBP52566 201 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 UBE2IP63279 158 aaKnown RBP13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 SIGLEC14Q08ET2 396 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 TAF13Q15543 124 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 GXYLT1Q4G148 440 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 FAM122BQ7Z309 247 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 RSC1A1Q92681 617 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 RERGQ96A58 199 aaPredicted RBP13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 C12orf57Q99622 126 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 EDEM2Q9BV94 578 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 PILRAQ9UKJ1 303 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 NOTCH4Q99466 2003 aa13.44□□□□□ -0.26
CACNA1A-220ENST00000635988 NPIPB9F8W1W9 429 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 TXNDC12O95881 172 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 CSTAP01040 98 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 AMY2AP04746 511 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 ITGA5P08648 1049 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 RPL35P42766 123 aaKnown RBP13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 RPS21P63220 83 aaKnown RBP13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 DHRS2Q13268 280 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 MICBQ29980 383 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 EMC4Q5J8M3 183 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 FIGLAQ6QHK4 219 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 NDUFAF7Q7L592 441 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 CACUL1Q86Y37 369 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 ZNF440Q8IYI8 595 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 TMEM52Q8NDY8 209 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 OR1J4Q8NGS1 313 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 OR8K3Q8NH51 312 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 TSEN15Q8WW01 171 aaKnown RBP13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 LIPHQ8WWY8 451 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 SEH1LQ96EE3 360 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 C4orf45Q96LM5 186 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 G6PC3Q9BUM1 346 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 ZNF230Q9UIE0 474 aaPredicted RBP13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 PCDHB10Q9UN67 800 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 NOP16Q9Y3C1 178 aaKnown RBP13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 PDE4DIPQ5VU43 2346 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 RNF222A6NCQ9 220 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 BLOC1S5-TXNDC5H3BN57 136 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 OR10H2O60403 315 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 CYB5AP00167 134 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 IGKV1D-16P01601 117 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 ALOX5APP20292 161 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 C5AR1P21730 350 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 VIPR2P41587 438 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 MANEAQ5SRI9 462 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 ATPAF1Q5TC12 328 aaPredicted RBP13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 FDX2Q6P4F2 183 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 PUSL1Q8N0Z8 303 aaKnown RBP13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 INO80EQ8NBZ0 244 aaPredicted RBP13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 OR10AC1Q8NH08 325 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 ZBTB8AQ96BR9 441 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 ZNF75AQ96N20 296 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 TSSK2Q96PF2 358 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 ZFYVE21Q9BQ24 234 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 CXXC1Q9P0U4 656 aaPredicted RBP13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 EPHA6Q9UF33 1036 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 TBX21Q9UL17 535 aa13.43□□□□□ -0.26
CACNA1A-220ENST00000635988 A0A0A6YYH2 397 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 OTOL1A6NHN0 477 aaPredicted RBP13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 A6NJ64 397 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 ADH1BP00325 375 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 AQP2P41181 271 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 CTXN1P60606 82 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 ENPP2Q13822 863 aa13.42□□□□□ -0.26
CACNA1A-220ENST00000635988 ITPRIPL2Q3MIP1 535 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms