RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 CAMK2N2Q96S95 79 aa1.59□□□□□ -2.15
SRP54-214ENST00000630962 SORT1Q99523 831 aa1.59□□□□□ -2.15
SRP54-214ENST00000630962 MRPL37Q9BZE1 423 aaKnown RBP1.59□□□□□ -2.15
SRP54-214ENST00000630962 AZI2Q9H6S1 392 aa1.59□□□□□ -2.15
SRP54-214ENST00000630962 SYNDIG1Q9H7V2 258 aa1.59□□□□□ -2.15
SRP54-214ENST00000630962 CTSFQ9UBX1 484 aa1.59□□□□□ -2.15
SRP54-214ENST00000630962 KCNIP3Q9Y2W7 256 aa1.59□□□□□ -2.15
SRP54-214ENST00000630962 S4R3C0 116 aa1.59□□□□□ -2.15
SRP54-214ENST00000630962 MSH6P52701 1360 aa1.59□□□□□ -2.16
SRP54-214ENST00000630962 NUP214P35658 2090 aaPredicted RBP1.59□□□□□ -2.16
SRP54-214ENST00000630962 TRAV6A0A075B6T7 132 aa1.58□□□□□ -2.16
SRP54-214ENST00000630962 ERLIN2O94905 339 aa1.58□□□□□ -2.16
SRP54-214ENST00000630962 OR56A5P0C7T3 313 aa1.58□□□□□ -2.16
SRP54-214ENST00000630962 CALM1P0DP23 149 aa1.58□□□□□ -2.16
SRP54-214ENST00000630962 CALM2P0DP24 149 aa1.58□□□□□ -2.16
SRP54-214ENST00000630962 CALM3P0DP25 149 aa1.58□□□□□ -2.16
SRP54-214ENST00000630962 KRT13P13646 458 aa1.58□□□□□ -2.16
SRP54-214ENST00000630962 RPA2P15927 270 aa1.58□□□□□ -2.16
SRP54-214ENST00000630962 CD34P28906 385 aa1.58□□□□□ -2.16
SRP54-214ENST00000630962 MEF2BQ02080 365 aaPredicted RBP1.58□□□□□ -2.16
SRP54-214ENST00000630962 PIGHQ14442 188 aaPredicted RBP1.58□□□□□ -2.16
SRP54-214ENST00000630962 POU2AF1Q16633 256 aa1.58□□□□□ -2.16
SRP54-214ENST00000630962 USH1GQ495M9 461 aa1.58□□□□□ -2.16
SRP54-214ENST00000630962 THEM4Q5T1C6 240 aa1.58□□□□□ -2.16
SRP54-214ENST00000630962 RAET1LQ5VY80 246 aa1.58□□□□□ -2.16
SRP54-214ENST00000630962 AP1ARQ63HQ0 302 aa1.58□□□□□ -2.16
SRP54-214ENST00000630962 TRIM40Q6P9F5 258 aa1.58□□□□□ -2.16
SRP54-214ENST00000630962 ECHDC2Q86YB7 292 aa1.58□□□□□ -2.16
SRP54-214ENST00000630962 ZNF557Q8N988 423 aaPredicted RBP1.58□□□□□ -2.16
SRP54-214ENST00000630962 NECAP1Q8NC96 275 aa1.58□□□□□ -2.16
SRP54-214ENST00000630962 EMG1Q92979 244 aaKnown RBP1.58□□□□□ -2.16
SRP54-214ENST00000630962 LRRC58Q96CX6 371 aa1.58□□□□□ -2.16
SRP54-214ENST00000630962 SH3GL1Q99961 368 aa1.58□□□□□ -2.16
SRP54-214ENST00000630962 ZNF717Q9BY31 904 aaPredicted RBP1.58□□□□□ -2.16
SRP54-214ENST00000630962 ADAP2Q9NPF8 381 aa1.58□□□□□ -2.16
SRP54-214ENST00000630962 SMOXQ9NWM0 555 aa1.58□□□□□ -2.16
SRP54-214ENST00000630962 CIB4A0PJX0 185 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 PCP4L1A6NKN8 68 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 PRRG1O14668 218 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 ARPC3O15145 178 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 SOX15O60248 233 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 NOL3O60936 208 aaKnown RBP1.57□□□□□ -2.16
SRP54-214ENST00000630962 FABP3P05413 133 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 UGT2B4P06133 528 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 BCHEP06276 602 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 SOX6P35712 828 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 SERPINB5P36952 375 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 NCBP2P52298 156 aaKnown RBP eCLIP1.57□□□□□ -2.16
SRP54-214ENST00000630962 PRRX1P54821 245 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 PITPNAQ00169 270 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 OGDHQ02218 1023 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 NADK2Q4G0N4 442 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 VAX1Q5SQQ9 334 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 Q6ZPB1 254 aaPredicted RBP1.57□□□□□ -2.16
SRP54-214ENST00000630962 NTM-AS1Q6ZSK4 140 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 CALHM1Q8IU99 346 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 OSR2Q8N2R0 312 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 STPG2Q8N412 459 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 LINC00304Q8N9R0 145 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 MFSD9Q8NBP5 474 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 FAM83FQ8NEG4 500 aaPredicted RBP1.57□□□□□ -2.16
SRP54-214ENST00000630962 RNF139Q8WU17 664 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 ESR2Q92731 530 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 IFT74Q96LB3 600 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 HSFY1Q96LI6 401 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 RPRD1AQ96P16 312 aaPredicted RBP1.57□□□□□ -2.16
SRP54-214ENST00000630962 P2RX4Q99571 388 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 RNF5Q99942 180 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 FOXC2Q99958 501 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 SLC25A2Q9BXI2 301 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 PLA2G12AQ9BZM1 189 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 UBE2ZQ9H832 354 aaPredicted RBP1.57□□□□□ -2.16
SRP54-214ENST00000630962 SLC35D1Q9NTN3 355 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 MEMO1Q9Y316 297 aa1.57□□□□□ -2.16
SRP54-214ENST00000630962 GPATCH8Q9UKJ3 1502 aaKnown RBP1.56□□□□□ -2.16
SRP54-214ENST00000630962 RGSL1A5PLK6 1076 aa1.56□□□□□ -2.16
SRP54-214ENST00000630962 METTL21EPA6NDL7 271 aa1.56□□□□□ -2.16
SRP54-214ENST00000630962 ZNF233A6NK53 670 aa1.56□□□□□ -2.16
SRP54-214ENST00000630962 SGK1O00141 431 aa1.56□□□□□ -2.16
SRP54-214ENST00000630962 XPO1O14980 1071 aaKnown RBP1.56□□□□□ -2.16
SRP54-214ENST00000630962 CHST1O43916 411 aa1.56□□□□□ -2.16
SRP54-214ENST00000630962 RP2O75695 350 aa1.56□□□□□ -2.16
SRP54-214ENST00000630962 CDRT1O95170 752 aa1.56□□□□□ -2.16
SRP54-214ENST00000630962 IGHV2-5P01817 119 aa1.56□□□□□ -2.16
SRP54-214ENST00000630962 CCNB1P14635 433 aa1.56□□□□□ -2.16
SRP54-214ENST00000630962 CD1CP29017 333 aa1.56□□□□□ -2.16
SRP54-214ENST00000630962 OPRK1P41145 380 aa1.56□□□□□ -2.16
SRP54-214ENST00000630962 FLI1Q01543 452 aaPredicted RBP1.56□□□□□ -2.16
SRP54-214ENST00000630962 MRPL28Q13084 256 aaKnown RBP1.56□□□□□ -2.16
SRP54-214ENST00000630962 PON3Q15166 354 aa1.56□□□□□ -2.16
SRP54-214ENST00000630962 EXOC3L2Q2M3D2 409 aa1.56□□□□□ -2.16
SRP54-214ENST00000630962 OR4F3Q6IEY1 312 aa1.56□□□□□ -2.16
SRP54-214ENST00000630962 DUX4L9Q6RFH8 374 aaPredicted RBP1.56□□□□□ -2.16
SRP54-214ENST00000630962 BRD3OSQ6XYD6 125 aa1.56□□□□□ -2.16
SRP54-214ENST00000630962 KDM7AQ6ZMT4 941 aa1.56□□□□□ -2.16
SRP54-214ENST00000630962 TEX43Q6ZNM6 134 aa1.56□□□□□ -2.16
SRP54-214ENST00000630962 LINC00173Q6ZV60 143 aa1.56□□□□□ -2.16
SRP54-214ENST00000630962 OAFQ86UD1 273 aa1.56□□□□□ -2.16
SRP54-214ENST00000630962 KRTAP13-1Q8IUC0 172 aa1.56□□□□□ -2.16
SRP54-214ENST00000630962 TMEM123Q8N131 208 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms