RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 GKAP1Q5VSY0 366 aaPredicted RBP13.8□□□□□ -0.2
CHRNA4-211ENST00000628606 C8orf82Q6P1X6 216 aaPredicted RBP13.8□□□□□ -0.2
CHRNA4-211ENST00000628606 TMEM53Q6P2H8 277 aa13.8□□□□□ -0.2
CHRNA4-211ENST00000628606 LRFN4Q6PJG9 635 aa13.8□□□□□ -0.2
CHRNA4-211ENST00000628606 ZNF730Q6ZMV8 503 aa13.8□□□□□ -0.2
CHRNA4-211ENST00000628606 DPPA2Q7Z7J5 298 aa13.8□□□□□ -0.2
CHRNA4-211ENST00000628606 RNF113BQ8IZP6 322 aaKnown RBP13.8□□□□□ -0.2
CHRNA4-211ENST00000628606 SYT14Q8NB59 555 aa13.8□□□□□ -0.2
CHRNA4-211ENST00000628606 MAPK1IP1LQ8NDC0 245 aa13.8□□□□□ -0.2
CHRNA4-211ENST00000628606 FAM168AQ92567 244 aa13.8□□□□□ -0.2
CHRNA4-211ENST00000628606 KCNN2Q9H2S1 579 aa13.8□□□□□ -0.2
CHRNA4-211ENST00000628606 ZNF442Q9H7R0 627 aa13.8□□□□□ -0.2
CHRNA4-211ENST00000628606 ABCD2Q9UBJ2 740 aa13.8□□□□□ -0.2
CHRNA4-211ENST00000628606 J3KTA2 159 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 PIP5K1CO60331 668 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 F12P00748 615 aaPredicted RBP13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 ACADSP16219 412 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 NCK1P16333 377 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 HOXB4P17483 251 aaPredicted RBP13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 PCSK6P29122 969 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 THBS4P35443 961 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 MYBPC1Q00872 1141 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 HGFACQ04756 655 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 SNTB2Q13425 540 aaKnown RBP13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 EFNB3Q15768 340 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 MST1LQ2TV78 715 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 SLC36A2Q495M3 483 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 GLYATQ6IB77 296 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 KRT80Q6KB66 452 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 DNM1P46Q6ZS02 220 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 OAFQ86UD1 273 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 MYPOPQ86VE0 399 aaPredicted RBP13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 SKA3Q8IX90 412 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 NRMQ8IXM6 262 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 ZNF525Q8N782 197 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 NOXO1Q8NFA2 376 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 MOSPD2Q8NHP6 518 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 ASB10Q8WXI3 467 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 MCHR2Q969V1 340 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 ZNF347Q96SE7 839 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 NDEL1Q9GZM8 345 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 RAB1BQ9H0U4 201 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 TXNIPQ9H3M7 391 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 PLK3Q9H4B4 646 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 NOX3Q9HBY0 568 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 TMEM38BQ9NVV0 291 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 EGFL7Q9UHF1 273 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 CMAHPQ9Y471 501 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 SNX13Q9Y5W8 968 aa13.79□□□□□ -0.2
CHRNA4-211ENST00000628606 ABCA1O95477 2261 aa13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 hCG_2039718K7EN88 272 aa13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 MGRN1O60291 552 aa13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 TRMUO75648 421 aaKnown RBP13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 PTHP01270 115 aa13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 SLC25A16P16260 332 aa13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 ZNF14P17017 642 aaPredicted RBP13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 NR4A1P22736 598 aa13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 GUCA1AP43080 201 aaPredicted RBP13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 GYS2P54840 703 aa13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 RPS23P62266 143 aaKnown RBP13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 PLP2Q04941 152 aa13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 CD47Q08722 323 aa13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 TOP3AQ13472 1001 aaPredicted RBP13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 RAB39AQ14964 217 aa13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 ANKDD1AQ495B1 522 aa13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 SLC16A14Q7RTX9 510 aa13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 OR10H5Q8NGA6 315 aa13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 OR4K5Q8NGD3 323 aa13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 ACOT11Q8WXI4 607 aaPredicted RBP13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 MS4A3Q96HJ5 214 aa13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 LRRC37BQ96QE4 947 aa13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 RBP7Q96R05 134 aa13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 SH3GL3Q99963 347 aa13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 MRPL13Q9BYD1 178 aaKnown RBP13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 DYNLRB1Q9NP97 96 aa13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 SAMD4AQ9UPU9 718 aaKnown RBP13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 HIF3AQ9Y2N7 669 aa13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 ARL2BPQ9Y2Y0 163 aa13.78□□□□□ -0.2
CHRNA4-211ENST00000628606 IGHV4-30-2A0A087WSY4 118 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 NPIPB13A6NJU9 1138 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 EFCAB9A8MZ26 197 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 NPIPB4C9JG80 1138 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 DCTN3O75935 186 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 SERPINA5P05154 406 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 TSPAN19P0C672 248 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 PATE4P0C8F1 98 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 SLC9A3P48764 834 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 PPOXP50336 477 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 PDLIM4P50479 330 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 CTXN1P60606 82 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 RPL27P61353 136 aaKnown RBP13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 MXRA7P84157 204 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 PRKCDQ05655 676 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 RUNX1T1Q06455 604 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 KRT72Q14CN4 511 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 CARTPTQ16568 116 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 HIST3H3Q16695 136 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 KRTAP21-3Q3LHN1 58 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 NRN1LQ496H8 165 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 OR51A7Q8NH64 312 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms