RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 GDNFP39905 211 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 OR1D4P47884 311 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 CCR6P51684 374 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 BIKQ13323 160 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 ARHGAP40Q5TG30 622 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 PRSS45Q7RTY3 260 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 JAZF1Q86VZ6 243 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 ZNF527Q8NB42 609 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 SLC38A9Q8NBW4 561 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 PHF21AQ96BD5 680 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 MAP6Q96JE9 813 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 ZNF304Q9HCX3 659 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 ING4Q9UNL4 249 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 CPAMD8Q8IZJ3 1885 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 SPTBN4Q9H254 2564 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 C9orf172C9J069 976 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 ABHD16AO95870 558 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 H2AFB2P0C5Z0 115 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 MST1P26927 711 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 EGR4Q05215 589 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 SNTB2Q13425 540 aaKnown RBP15.78■□□□□ 0.12
FAM3A-222ENST00000621967 NUP54Q7Z3B4 507 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 GATSQ8NAP1 163 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 LSM14AQ8ND56 463 aaKnown RBP15.78■□□□□ 0.12
FAM3A-222ENST00000621967 HGDQ93099 445 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 ORAI1Q96D31 301 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 GPR137Q96N19 417 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 MRI1Q9BV20 369 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 ACTR6Q9GZN1 396 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 SLC25A18Q9H1K4 315 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 RANBP3Q9H6Z4 567 aaPredicted RBP15.78■□□□□ 0.12
FAM3A-222ENST00000621967 NANSQ9NR45 359 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 SPTBN2O15020 2390 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 PCNX3Q9H6A9 2034 aa15.78■□□□□ 0.12
FAM3A-222ENST00000621967 C17orf105B2RV13 164 aa15.77■□□□□ 0.12
FAM3A-222ENST00000621967 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.77■□□□□ 0.12
FAM3A-222ENST00000621967 BLOC1S5-TXNDC5H3BN57 136 aa15.77■□□□□ 0.12
FAM3A-222ENST00000621967 ZNF593O00488 134 aaPredicted RBP15.77■□□□□ 0.12
FAM3A-222ENST00000621967 ITGA10O75578 1167 aa15.77■□□□□ 0.12
FAM3A-222ENST00000621967 UPK3AO75631 287 aa15.77■□□□□ 0.12
FAM3A-222ENST00000621967 STK17BO94768 372 aa15.77■□□□□ 0.12
FAM3A-222ENST00000621967 MT-ND4P03905 459 aa15.77■□□□□ 0.12
FAM3A-222ENST00000621967 KLK3P07288 261 aaPredicted RBP15.77■□□□□ 0.12
FAM3A-222ENST00000621967 TACSTD2P09758 323 aa15.77■□□□□ 0.12
FAM3A-222ENST00000621967 GRPRP30550 384 aa15.77■□□□□ 0.12
FAM3A-222ENST00000621967 SLC37A1P57057 533 aa15.77■□□□□ 0.12
FAM3A-222ENST00000621967 DCDP81605 110 aaKnown RBP15.77■□□□□ 0.12
FAM3A-222ENST00000621967 LTBQ06643 244 aa15.77■□□□□ 0.12
FAM3A-222ENST00000621967 ALG10Q5BKT4 473 aa15.77■□□□□ 0.12
FAM3A-222ENST00000621967 FAM69AQ5T7M9 428 aa15.77■□□□□ 0.12
FAM3A-222ENST00000621967 HES5Q5TA89 166 aa15.77■□□□□ 0.12
FAM3A-222ENST00000621967 CBLN3Q6UW01 205 aa15.77■□□□□ 0.12
FAM3A-222ENST00000621967 FGD2Q7Z6J4 655 aa15.77■□□□□ 0.12
FAM3A-222ENST00000621967 TIGD4Q8IY51 512 aa15.77■□□□□ 0.12
FAM3A-222ENST00000621967 ZNF511Q8NB15 262 aa15.77■□□□□ 0.12
FAM3A-222ENST00000621967 OR56B4Q8NH76 319 aa15.77■□□□□ 0.12
FAM3A-222ENST00000621967 PTPMT1Q8WUK0 201 aaPredicted RBP15.77■□□□□ 0.12
FAM3A-222ENST00000621967 EMC3Q9P0I2 261 aa15.77■□□□□ 0.12
FAM3A-222ENST00000621967 KLHDC2Q9Y2U9 406 aa15.77■□□□□ 0.12
FAM3A-222ENST00000621967 V9GY05 133 aa15.77■□□□□ 0.12
FAM3A-222ENST00000621967 FAM171A2A8MVW0 826 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 PSMD9O00233 223 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 MEN1O00255 615 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 SULT1A3P0DMM9 295 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 SULT1A4P0DMN0 295 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 CXCL3P19876 107 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 RORAP35398 523 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 PPICP45877 212 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 ID4P47928 161 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 CTXN1P60606 82 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 C19orf57Q0VDD7 668 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 EMC4Q5J8M3 183 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 APOOLQ6UXV4 268 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 CDC20BQ86Y33 519 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 IZUMO1Q8IYV9 350 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 PHOSPHO1Q8TCT1 267 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.76■□□□□ 0.11
FAM3A-222ENST00000621967 GIMAP1Q8WWP7 306 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 TSSK2Q96PF2 358 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 C12orf10Q9HB07 376 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 LANCL2Q9NS86 450 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 FOXJ2Q9P0K8 574 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 MRM2Q9UI43 246 aaKnown RBP15.76■□□□□ 0.11
FAM3A-222ENST00000621967 SEC16AO15027 2179 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 TRBV5-5A0A0J9YX44 114 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 TMEM72A0PK05 275 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 GABARAPH6UMI1 98 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 ZNF264O43296 627 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 SULT1B1O43704 296 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 SERPINI2O75830 405 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 UTS2O95399 124 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 CALCBP10092 127 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 ST3GAL2Q16842 350 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 NKAIN1Q4KMZ8 207 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 ZNF524Q96C55 264 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 SLC46A1Q96NT5 459 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 LPAR4Q99677 370 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 TSPAN10Q9H1Z9 355 aaPredicted RBP15.76■□□□□ 0.11
FAM3A-222ENST00000621967 LIN7BQ9HAP6 207 aa15.76■□□□□ 0.11
FAM3A-222ENST00000621967 SLC23A1Q9UHI7 598 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms