RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 HEATR1Q9H583 2144 aaKnown RBP13.9□□□□□ -0.18
BRCA1-228ENST00000618469 IGKV3-15P01624 115 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 IGLV1-44P01699 117 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 CRYAAP02489 173 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 TSPAN19P0C672 248 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 CD79AP11912 226 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 RHCEP18577 417 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 TTKP33981 857 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 FABP6P51161 128 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 MYBPC1Q00872 1141 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 NAAAQ02083 359 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 LAPTM4AQ15012 233 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 AGAP6Q5VW22 663 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 RRM2BQ7LG56 351 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 IGFN1Q86VF2 1251 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 CCDC36Q8IYA8 594 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 FBXL14Q8N1E6 418 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 MUC15Q8N387 334 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 SYT14Q8NB59 555 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 OR51A7Q8NH64 312 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 SLC7A13Q8TCU3 470 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 NSL1Q96IY1 281 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 C7orf34Q96L11 122 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 ZNF347Q96SE7 839 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 NOX3Q9HBY0 568 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 ALPK2Q86TB3 2170 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 USF3Q68DE3 2245 aa13.9□□□□□ -0.18
BRCA1-228ENST00000618469 A0A1W2PRQ8 180 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 RNF212BA8MTL3 300 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 OVOL3O00110 214 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 DHHO43323 396 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 CD8AP01732 235 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 SEMG1P04279 462 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 QDPRP09417 244 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 CBR1P16152 277 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 ACADSP16219 412 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 ATP6V1B2P21281 511 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 CALB2P22676 271 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 CALCRP30988 508 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 ARR3P36575 388 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 SLC9A3P48764 834 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 SPIBQ01892 262 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 DGCR6Q14129 220 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 GSG1Q2KHT4 349 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 C3orf36Q3SXR2 165 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 SPATS1Q496A3 300 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 ARMC4Q5T2S8 1044 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 ZNF544Q6NX49 715 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 PODNL1Q6PEZ8 512 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 PRSS57Q6UWY2 283 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 ZNF627Q7L945 461 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 OAFQ86UD1 273 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 CDK20Q8IZL9 346 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 RNF113BQ8IZP6 322 aaKnown RBP13.89□□□□□ -0.19
BRCA1-228ENST00000618469 FAM169BQ8N8A8 192 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 HTRA1Q92743 480 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 MCUR1Q96AQ8 359 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 TRMT61AQ96FX7 289 aaKnown RBP13.89□□□□□ -0.19
BRCA1-228ENST00000618469 PYURFQ96I23 114 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 FAM46AQ96IP4 442 aaKnown RBP13.89□□□□□ -0.19
BRCA1-228ENST00000618469 BDH2Q9BUT1 245 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 TXNIPQ9H3M7 391 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 CBLN4Q9NTU7 201 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 TMEM38BQ9NVV0 291 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 STX18Q9P2W9 335 aaKnown RBP13.89□□□□□ -0.19
BRCA1-228ENST00000618469 TMEM5Q9Y2B1 443 aa13.89□□□□□ -0.19
BRCA1-228ENST00000618469 STAB1Q9NY15 2570 aa13.88□□□□□ -0.19
BRCA1-228ENST00000618469 TRBV4-1A0A0J9YWV2 114 aa13.88□□□□□ -0.19
BRCA1-228ENST00000618469 NPIPB13A6NJU9 1138 aa13.88□□□□□ -0.19
BRCA1-228ENST00000618469 CENPBD1B2RD01 187 aa13.88□□□□□ -0.19
BRCA1-228ENST00000618469 NPIPB4C9JG80 1138 aa13.88□□□□□ -0.19
BRCA1-228ENST00000618469 CDC42EP2O14613 210 aa13.88□□□□□ -0.19
BRCA1-228ENST00000618469 TRMUO75648 421 aaKnown RBP13.88□□□□□ -0.19
BRCA1-228ENST00000618469 PDE5AO76074 875 aa13.88□□□□□ -0.19
BRCA1-228ENST00000618469 RAB36O95755 333 aa13.88□□□□□ -0.19
BRCA1-228ENST00000618469 IGHMP01871 453 aa13.88□□□□□ -0.19
BRCA1-228ENST00000618469 ITGA2P17301 1181 aa13.88□□□□□ -0.19
BRCA1-228ENST00000618469 PTDSS1P48651 473 aaKnown RBP13.88□□□□□ -0.19
BRCA1-228ENST00000618469 CTXN1P60606 82 aa13.88□□□□□ -0.19
BRCA1-228ENST00000618469 FMODQ06828 376 aa13.88□□□□□ -0.19
BRCA1-228ENST00000618469 PIGFQ07326 219 aa13.88□□□□□ -0.19
BRCA1-228ENST00000618469 CD47Q08722 323 aa13.88□□□□□ -0.19
BRCA1-228ENST00000618469 C11orf71Q6IPW1 123 aa13.88□□□□□ -0.19
BRCA1-228ENST00000618469 LRFN4Q6PJG9 635 aa13.88□□□□□ -0.19
BRCA1-228ENST00000618469 CYP2R1Q6VVX0 501 aa13.88□□□□□ -0.19
BRCA1-228ENST00000618469 OR52J3Q8NH60 311 aa13.88□□□□□ -0.19
BRCA1-228ENST00000618469 HDAC2Q92769 488 aaKnown RBP13.88□□□□□ -0.19
BRCA1-228ENST00000618469 MCHR2Q969V1 340 aa13.88□□□□□ -0.19
BRCA1-228ENST00000618469 TSPAN32Q96QS1 320 aa13.88□□□□□ -0.19
BRCA1-228ENST00000618469 SEPHS2Q99611 448 aa13.88□□□□□ -0.19
BRCA1-228ENST00000618469 CACNG6Q9BXT2 260 aa13.88□□□□□ -0.19
BRCA1-228ENST00000618469 MRPL13Q9BYD1 178 aaKnown RBP13.88□□□□□ -0.19
BRCA1-228ENST00000618469 ZNF224Q9NZL3 707 aa13.88□□□□□ -0.19
BRCA1-228ENST00000618469 UBL3O95164 117 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 FARS2O95363 451 aaKnown RBP13.87□□□□□ -0.19
BRCA1-228ENST00000618469 SLC2A10O95528 541 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 FABP3P05413 133 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 ACVR1BP36896 505 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 GIPRP48546 466 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 ZNF84P51523 738 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms