RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 ZNF35P13682 527 aa21.78■■□□□ 1.08
VEGFA-228ENST00000617771 LSP1P33241 339 aa21.78■■□□□ 1.08
VEGFA-228ENST00000617771 ZNF84P51523 738 aa21.78■■□□□ 1.08
VEGFA-228ENST00000617771 VLDLRP98155 873 aa21.78■■□□□ 1.08
VEGFA-228ENST00000617771 GALK2Q01415 458 aa21.78■■□□□ 1.08
VEGFA-228ENST00000617771 HIST3H3Q16695 136 aa21.78■■□□□ 1.08
VEGFA-228ENST00000617771 HACD2Q6Y1H2 254 aa21.78■■□□□ 1.08
VEGFA-228ENST00000617771 DPPA2Q7Z7J5 298 aa21.78■■□□□ 1.08
VEGFA-228ENST00000617771 PRIMA1Q86XR5 153 aa21.78■■□□□ 1.08
VEGFA-228ENST00000617771 ASB10Q8WXI3 467 aa21.78■■□□□ 1.08
VEGFA-228ENST00000617771 MCHR2Q969V1 340 aa21.78■■□□□ 1.08
VEGFA-228ENST00000617771 ZNF347Q96SE7 839 aa21.78■■□□□ 1.08
VEGFA-228ENST00000617771 MRPL13Q9BYD1 178 aaKnown RBP21.78■■□□□ 1.08
VEGFA-228ENST00000617771 DYNLRB1Q9NP97 96 aa21.78■■□□□ 1.08
VEGFA-228ENST00000617771 GMPR2Q9P2T1 348 aaKnown RBP21.78■■□□□ 1.08
VEGFA-228ENST00000617771 LOC390937A0A1W2PQ73 354 aa21.77■■□□□ 1.08
VEGFA-228ENST00000617771 NME4O00746 187 aa21.77■■□□□ 1.08
VEGFA-228ENST00000617771 TSPAN19P0C672 248 aa21.77■■□□□ 1.08
VEGFA-228ENST00000617771 ACADSP16219 412 aa21.77■■□□□ 1.08
VEGFA-228ENST00000617771 USF1P22415 310 aaPredicted RBP21.77■■□□□ 1.08
VEGFA-228ENST00000617771 NUDT2P50583 147 aa21.77■■□□□ 1.08
VEGFA-228ENST00000617771 RPS23P62266 143 aaKnown RBP21.77■■□□□ 1.08
VEGFA-228ENST00000617771 RAB39AQ14964 217 aa21.77■■□□□ 1.08
VEGFA-228ENST00000617771 CARTPTQ16568 116 aa21.77■■□□□ 1.08
VEGFA-228ENST00000617771 NRN1LQ496H8 165 aa21.77■■□□□ 1.08
VEGFA-228ENST00000617771 GKAP1Q5VSY0 366 aaPredicted RBP21.77■■□□□ 1.08
VEGFA-228ENST00000617771 VTCN1Q7Z7D3 282 aa21.77■■□□□ 1.08
VEGFA-228ENST00000617771 MOSPD2Q8NHP6 518 aa21.77■■□□□ 1.08
VEGFA-228ENST00000617771 GEMIN6Q8WXD5 167 aaKnown RBP21.77■■□□□ 1.08
VEGFA-228ENST00000617771 FNDC11Q9BVV2 318 aa21.77■■□□□ 1.08
VEGFA-228ENST00000617771 TMEM129A0AVI4 362 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 NPIPB13A6NJU9 1138 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 NPIPB4C9JG80 1138 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 PIP5K1CO60331 668 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 TRMUO75648 421 aaKnown RBP21.76■■□□□ 1.07
VEGFA-228ENST00000617771 ZNF682O95780 498 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 SERPINA5P05154 406 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 PATE4P0C8F1 98 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 IFI30P13284 250 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 GLRXP35754 106 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 RUNX1T1Q06455 604 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 IFI44LQ53G44 452 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 ARFGEF3Q5TH69 2177 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 C8orf82Q6P1X6 216 aaPredicted RBP21.76■■□□□ 1.07
VEGFA-228ENST00000617771 TMEM53Q6P2H8 277 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 CBLL1Q75N03 491 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 ALPK2Q86TB3 2170 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 TREML1Q86YW5 311 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 OFCC1Q8IZS5 231 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 SYT14Q8NB59 555 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 OR4K5Q8NGD3 323 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 NEU4Q8WWR8 484 aaPredicted RBP21.76■■□□□ 1.07
VEGFA-228ENST00000617771 BPIFA2Q96DR5 249 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 CMTM5Q96DZ9 223 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 SEPHS2Q99611 448 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 SH3GL3Q99963 347 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 ELAC2Q9BQ52 826 aaKnown RBP21.76■■□□□ 1.07
VEGFA-228ENST00000617771 HIF3AQ9Y2N7 669 aa21.76■■□□□ 1.07
VEGFA-228ENST00000617771 TLN2Q9Y4G6 2542 aa21.75■■□□□ 1.07
VEGFA-228ENST00000617771 A8MV72 311 aaPredicted RBP21.75■■□□□ 1.07
VEGFA-228ENST00000617771 MGRN1O60291 552 aa21.75■■□□□ 1.07
VEGFA-228ENST00000617771 NR2C1P13056 603 aa21.75■■□□□ 1.07
VEGFA-228ENST00000617771 NR4A2P43354 598 aa21.75■■□□□ 1.07
VEGFA-228ENST00000617771 YAP1P46937 504 aaKnown RBP21.75■■□□□ 1.07
VEGFA-228ENST00000617771 EVX1P49640 407 aa21.75■■□□□ 1.07
VEGFA-228ENST00000617771 GSK3BP49841 420 aa21.75■■□□□ 1.07
VEGFA-228ENST00000617771 MYBPC1Q00872 1141 aa21.75■■□□□ 1.07
VEGFA-228ENST00000617771 TRAM2Q15035 370 aa21.75■■□□□ 1.07
VEGFA-228ENST00000617771 TAF11Q15544 211 aa21.75■■□□□ 1.07
VEGFA-228ENST00000617771 SLC36A2Q495M3 483 aa21.75■■□□□ 1.07
VEGFA-228ENST00000617771 ALG10Q5BKT4 473 aa21.75■■□□□ 1.07
VEGFA-228ENST00000617771 C6orf52Q5T4I8 152 aa21.75■■□□□ 1.07
VEGFA-228ENST00000617771 SLC16A14Q7RTX9 510 aa21.75■■□□□ 1.07
VEGFA-228ENST00000617771 CDK20Q8IZL9 346 aa21.75■■□□□ 1.07
VEGFA-228ENST00000617771 FGFBP3Q8TAT2 258 aa21.75■■□□□ 1.07
VEGFA-228ENST00000617771 MRPL24Q96A35 216 aaKnown RBP21.75■■□□□ 1.07
VEGFA-228ENST00000617771 RNF121Q9H920 327 aa21.75■■□□□ 1.07
VEGFA-228ENST00000617771 SLC7A8Q9UHI5 535 aa21.75■■□□□ 1.07
VEGFA-228ENST00000617771 SH3PXD2BA1X283 911 aa21.74■■□□□ 1.07
VEGFA-228ENST00000617771 VWC2LB2RUY7 222 aa21.74■■□□□ 1.07
VEGFA-228ENST00000617771 LSM11P83369 360 aaKnown RBP eCLIP21.74■■□□□ 1.072e-28■□□□□ 11.1
VEGFA-228ENST00000617771 LAPTM4AQ15012 233 aa21.74■■□□□ 1.07
VEGFA-228ENST00000617771 C10orf128Q5T292 105 aa21.74■■□□□ 1.07
VEGFA-228ENST00000617771 ARMC4Q5T2S8 1044 aa21.74■■□□□ 1.07
VEGFA-228ENST00000617771 FKBP9P1Q75LS8 142 aa21.74■■□□□ 1.07
VEGFA-228ENST00000617771 ZNF584Q8IVC4 421 aa21.74■■□□□ 1.07
VEGFA-228ENST00000617771 ZNF540Q8NDQ6 660 aa21.74■■□□□ 1.07
VEGFA-228ENST00000617771 KCTD14Q9BQ13 255 aaPredicted RBP21.74■■□□□ 1.07
VEGFA-228ENST00000617771 TXNIPQ9H3M7 391 aa21.74■■□□□ 1.07
VEGFA-228ENST00000617771 C1orf198Q9H425 327 aa21.74■■□□□ 1.07
VEGFA-228ENST00000617771 RHCGQ9UBD6 479 aa21.74■■□□□ 1.07
VEGFA-228ENST00000617771 SNX13Q9Y5W8 968 aa21.74■■□□□ 1.07
VEGFA-228ENST00000617771 J3KTA2 159 aa21.73■■□□□ 1.07
VEGFA-228ENST00000617771 SERPINA1P01009 418 aa21.73■■□□□ 1.07
VEGFA-228ENST00000617771 PTHP01270 115 aa21.73■■□□□ 1.07
VEGFA-228ENST00000617771 SAGP10523 405 aaPredicted RBP21.73■■□□□ 1.07
VEGFA-228ENST00000617771 ZNF133P52736 654 aaPredicted RBP21.73■■□□□ 1.07
VEGFA-228ENST00000617771 GGTLC2Q14390 218 aa21.73■■□□□ 1.07
VEGFA-228ENST00000617771 CYB5R2Q6BCY4 276 aa21.73■■□□□ 1.07
VEGFA-228ENST00000617771 SLC30A7Q8NEW0 376 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms