RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 ZNF587BE7ETH6 402 aa13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 SLC2A10O95528 541 aa13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 SNAP29O95721 258 aa13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 IGHV1-2P23083 117 aa13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 HIST3H3Q16695 136 aa13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 ZNF362Q5T0B9 420 aaPredicted RBP13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 FBXW10Q5XX13 1052 aa13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 ABHD12BQ7Z5M8 362 aaPredicted RBP13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 ADCK1Q86TW2 530 aa13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 CXorf67Q86X51 503 aaPredicted RBP13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 NPEPL1Q8NDH3 523 aa13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 SDR9C7Q8NEX9 313 aa13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 NMD3Q96D46 503 aaKnown RBP13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 ZNF837Q96EG3 531 aaPredicted RBP13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 MBOAT4Q96T53 435 aa13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 TEX12Q9BXU0 123 aa13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 CRLF2Q9HC73 371 aa13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 GALNT8Q9NY28 637 aa13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 ELOVL5Q9NYP7 299 aa13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 TVP23BQ9NYZ1 205 aa13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 KLHL21Q9UJP4 597 aa13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 RELNP78509 3460 aa13.76□□□□□ -0.21
PCDHGC3-204ENST00000617222 MYO18BQ8IUG5 2567 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 IGKV1D-43A0A0B4J1Z2 117 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 RIIAD1A6NNX1 92 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 RPL36A-HNRNPH2H7BZ11 118 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 AHCYL1O43865 530 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 RENP00797 406 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 IFNGP01579 166 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 ITGA5P08648 1049 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 MPGP29372 298 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 CD79BP40259 229 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 FMODQ06828 376 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 ITGADQ13349 1161 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 P2RY6Q15077 328 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 TSC22D1Q15714 1073 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 SNAPC1Q16533 368 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 CEACAM16Q2WEN9 425 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 FBXL19-AS1Q494R0 122 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 THEM4Q5T1C6 240 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 SLX4IPQ5VYV7 408 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 SLC25A47Q6Q0C1 308 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 ZNF433Q8N7K0 673 aaPredicted RBP13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 CYB561A3Q8NBI2 242 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 SLC37A3Q8NCC5 494 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 NSMAFQ92636 917 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 RNASE6Q93091 150 aaKnown RBP13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 LRRC46Q96FV0 321 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 DDOQ99489 341 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 GRIP2Q9C0E4 1043 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 SYT4Q9H2B2 425 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 CMC2Q9NRP2 79 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 SMPD3Q9NY59 655 aaPredicted RBP13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 VSX1Q9NZR4 365 aaPredicted RBP13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 FREM1Q5H8C1 2179 aa13.75□□□□□ -0.21
PCDHGC3-204ENST00000617222 OR6C68A6NDL8 312 aa13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 DLGAP1O14490 977 aa13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 SURF4O15260 269 aa13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 DHHO43323 396 aa13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 LYZL6O75951 148 aa13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 NR2C1P13056 603 aa13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 PTDSS1P48651 473 aaKnown RBP13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 ARF1P84077 181 aaKnown RBP13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 TFF3Q07654 80 aa13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 DBPQ10586 325 aaPredicted RBP13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 CRMP1Q14194 572 aa13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 SFRP5Q5T4F7 317 aa13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 C12orf73Q69YU5 71 aa13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 STAC2Q6ZMT1 411 aa13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 FNDC8Q8TC99 324 aa13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 PLEKHA8Q96JA3 519 aa13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 RDH12Q96NR8 316 aa13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 TSSK2Q96PF2 358 aa13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 SLC38A2Q96QD8 506 aa13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 SNX18Q96RF0 628 aa13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 VCXQ9H320 206 aa13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 FN3KQ9H479 309 aa13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 RERGLQ9H628 205 aa13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 SRA1Q9HD15 236 aaKnown RBP13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 RPRD1BQ9NQG5 326 aaKnown RBP13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 TAS2R16Q9NYV7 291 aa13.74□□□□□ -0.21
PCDHGC3-204ENST00000617222 CIB4A0PJX0 185 aa13.73□□□□□ -0.21
PCDHGC3-204ENST00000617222 C16orf97H3BN30 126 aa13.73□□□□□ -0.21
PCDHGC3-204ENST00000617222 SLC16A7O60669 478 aa13.73□□□□□ -0.21
PCDHGC3-204ENST00000617222 CTLA4P16410 223 aa13.73□□□□□ -0.21
PCDHGC3-204ENST00000617222 ZNF3P17036 446 aa13.73□□□□□ -0.21
PCDHGC3-204ENST00000617222 COX5AP20674 150 aa13.73□□□□□ -0.21
PCDHGC3-204ENST00000617222 IL32P24001 234 aa13.73□□□□□ -0.21
PCDHGC3-204ENST00000617222 GRNP28799 593 aaKnown RBP13.73□□□□□ -0.21
PCDHGC3-204ENST00000617222 ZNF133P52736 654 aaPredicted RBP13.73□□□□□ -0.21
PCDHGC3-204ENST00000617222 ETFDHQ16134 617 aa13.73□□□□□ -0.21
PCDHGC3-204ENST00000617222 BHLHA15Q7RTS1 189 aaPredicted RBP13.73□□□□□ -0.21
PCDHGC3-204ENST00000617222 KISS1RQ969F8 398 aaPredicted RBP13.73□□□□□ -0.21
PCDHGC3-204ENST00000617222 OTULINQ96BN8 352 aa13.73□□□□□ -0.21
PCDHGC3-204ENST00000617222 HDHD5Q9BXW7 423 aa13.73□□□□□ -0.21
PCDHGC3-204ENST00000617222 NUAK2Q9H093 628 aa13.73□□□□□ -0.21
PCDHGC3-204ENST00000617222 FAM118AQ9NWS6 357 aa13.73□□□□□ -0.21
PCDHGC3-204ENST00000617222 B9D1Q9UPM9 204 aa13.73□□□□□ -0.21
PCDHGC3-204ENST00000617222 GPR52Q9Y2T5 361 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms