RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 ZNF593O00488 134 aaPredicted RBP6.98□□□□□ -1.29
NEK3-207ENST00000617054 SEC14L5O43304 696 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 IDH3BO43837 385 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 SNX4O95219 450 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 EDNRAP25101 427 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 SOX6P35712 828 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 MFAP5Q13361 173 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 TMED1Q13445 227 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 CEACAM19Q7Z692 300 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 PIP4P1Q86T03 277 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 THNSL2Q86YJ6 484 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 LINC00346Q8IVM7 164 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 TIGD4Q8IY51 512 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 FADS6Q8N9I5 356 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 NKD1Q969G9 470 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 MRGPRX4Q96LA9 322 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 PGLYRP3Q96LB9 341 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 TXNIPQ9H3M7 391 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 ABCB10Q9NRK6 738 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 MRPL39Q9NYK5 338 aaKnown RBP6.98□□□□□ -1.29
NEK3-207ENST00000617054 COMMD3Q9UBI1 195 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 LAMP5Q9UJQ1 280 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 ZZEF1O43149 2961 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 RELNP78509 3460 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 OR2M5A3KFT3 312 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 NPIPA5E9PKD4 350 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 SULT2B1O00204 365 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 TNFSF11O14788 317 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 IL2RAP01589 272 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 PF4P02776 101 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 SPARCP09486 303 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 LIFP15018 202 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 ENPP1P22413 925 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 AZGP1P25311 298 aaKnown RBP6.98□□□□□ -1.29
NEK3-207ENST00000617054 CD96P40200 585 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 RORCP51449 518 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 CLDN20P56880 219 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 HSF1Q00613 529 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 ARMC4Q5T2S8 1044 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 C3orf33Q6P1S2 294 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 LRRN1Q6UXK5 716 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 PARP16Q8N5Y8 322 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 ABHD4Q8TB40 342 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 ZNF519Q8TB69 540 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 BORCS5Q969J3 196 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 NKX3-1Q99801 234 aaPredicted RBP6.98□□□□□ -1.29
NEK3-207ENST00000617054 ANGPTL4Q9BY76 406 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 MMP27Q9H306 513 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 SERINC1Q9NRX5 453 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 C14orf119Q9NWQ9 140 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 MRPL22Q9NWU5 206 aaKnown RBP6.98□□□□□ -1.29
NEK3-207ENST00000617054 LRFN1Q9P244 771 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 B3GAT1Q9P2W7 334 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 MALT1Q9UDY8 824 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 PLEKHB1Q9UF11 243 aaPredicted RBP6.98□□□□□ -1.29
NEK3-207ENST00000617054 DKKL1Q9UK85 242 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 NPIPA1Q9UND3 350 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 GTF2A1LQ9UNN4 478 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 LINC00854A0A1B0GVQ3 168 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 A6NJY4 79 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 TBX1O43435 398 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 TXNDC12O95881 172 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 HPP00738 406 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 IGF2P01344 180 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 P04436 131 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 HLA-DPB1P04440 258 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 CDAP32320 146 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 TNFSF8P32971 234 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 S100A5P33763 92 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 CYB561P49447 251 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 SIRPAP78324 504 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 WIPI1Q5MNZ9 446 aaPredicted RBP6.97□□□□□ -1.29
NEK3-207ENST00000617054 DCAF10Q5QP82 559 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 EEF1A1P5Q5VTE0 462 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 LIPNQ5VXI9 398 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 TIGD3Q6B0B8 471 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 YIPF7Q8N8F6 280 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 OR2T4Q8NH00 348 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 MFSD8Q8NHS3 518 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 SLC25A46Q96AG3 418 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 DACH2Q96NX9 599 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 OR14A2Q96R54 314 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 LRFN3Q9BTN0 628 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 COL25A1Q9BXS0 654 aaPredicted RBP6.97□□□□□ -1.29
NEK3-207ENST00000617054 HMG20AQ9NP66 347 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 ABCB9Q9NP78 766 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 CHST11Q9NPF2 352 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 MRM2Q9UI43 246 aaKnown RBP6.97□□□□□ -1.29
NEK3-207ENST00000617054 ST6GALNAC2Q9UJ37 374 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 CLEC4AQ9UMR7 237 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 SVILO95425 2214 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 A0A0B4J203 849 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 RAB40ALP0C0E4 278 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 MSX1P28360 303 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 GDI2P50395 445 aaKnown RBP6.97□□□□□ -1.29
NEK3-207ENST00000617054 ADAM8P78325 824 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 POU4F2Q12837 409 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 GGTLC2Q14390 218 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 ACSM3Q53FZ2 586 aa6.97□□□□□ -1.29
NEK3-207ENST00000617054 LCN1P1Q5VSP4 162 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms