RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 LTBRP36941 435 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 TSPAN7P41732 249 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 PGAP1Q75T13 922 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 CMTM1Q8IZ96 169 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 OR4N2Q8NGD1 307 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 OR13C9Q8NGT0 318 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 SYNPRQ8TBG9 265 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 C11orf40Q8WZ69 217 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 TXNIPQ9H3M7 391 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 APMAPQ9HDC9 416 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 C14orf119Q9NWQ9 140 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 SIRT5Q9NXA8 310 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 ZNF346Q9UL40 294 aaKnown RBP8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 OTOFQ9HC10 1997 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 FUOMA2VDF0 154 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 TRIM64A6NGJ6 449 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 TNFSF11O14788 317 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 EIF2S3P41091 472 aaKnown RBP8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 GABRA2P47869 451 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 DEFA5Q01523 94 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 GNMTQ14749 295 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 KIRREL2Q6UWL6 708 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 OR11G2Q8NGC1 345 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 OIT3Q8WWZ8 545 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 DNASE2BQ8WZ79 361 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 PHYHIPQ92561 330 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 DUS3LQ96G46 650 aaKnown RBP8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 DECR2Q9NUI1 292 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 NDRG3Q9UGV2 375 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 PILRBQ9UKJ0 227 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 OR52A1Q9UKL2 312 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 TNFRSF10AO00220 468 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 SMAD9O15198 467 aaKnown RBP8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 GP1BAP07359 652 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 CSF1P09603 554 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 NUBPLQ8TB37 319 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 PSMF1Q92530 271 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 RRNAD1Q96FB5 475 aaKnown RBP8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 MAN2C1Q9NTJ4 1040 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 FKBP14Q9NWM8 211 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 MLXQ9UH92 298 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 OSGIN1Q9UJX0 560 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 MAP1BP46821 2468 aaKnown RBP8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 SOD1P00441 154 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 ZMAT1Q5H9K5 638 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 VASH2Q86V25 355 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 OR52I1Q8NGK6 324 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 GHSRQ92847 366 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 GATA6Q92908 595 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 MUL1Q969V5 352 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 ZC3HAV1LQ96H79 300 aaKnown RBP8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 CACNG6Q9BXT2 260 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 EGLN1Q9GZT9 426 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 ZFP64Q9NPA5 681 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 POLE4Q9NR33 117 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 MBD1Q9UIS9 605 aaPredicted RBP8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 PRELID1Q9Y255 219 aa8.6□□□□□ -1.03
CLTCL1-208ENST00000615606 NOTOA8MTQ0 251 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 PRAMEF4O60810 478 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 ZNF254O75437 659 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 SFTPBP07988 381 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 RAB40ALP0C0E4 278 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 GALNSP34059 522 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 MEOX1P50221 254 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 FAPQ12884 760 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 CLN3Q13286 438 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 PCGF3Q3KNV8 242 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 PRAMEF9Q5VWM5 478 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 ANKRD13BQ86YJ7 626 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 SPAG16Q8N0X2 631 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 RAB40AQ8WXH6 277 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 BOD1Q96IK1 185 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 TEAD3Q99594 435 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 ARHGDIGQ99819 225 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 KCNG2Q9UJ96 466 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 GPR55Q9Y2T6 319 aaPredicted RBP8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 ALG5Q9Y673 324 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 KNTC1P50748 2209 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 ARID2Q68CP9 1835 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 NAP1L6A6NFF2 107 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 H3BMQ9 156 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 I3L521 148 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 P2RY10O00398 339 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 CA5AP35218 305 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 AKR1C2P52895 323 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 PPP5CP53041 499 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 WNT3P56703 355 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 RPS18P62269 152 aaKnown RBP8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 ISXQ2M1V0 245 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 YIF1BQ5BJH7 314 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 CNIH2Q6PI25 160 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 CALHM3Q86XJ0 350 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 SLC22A18ASQ8N1D0 253 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 CRIPAKQ8N1N5 446 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 OR10G3Q8NGC4 313 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 TMEM106AQ96A25 262 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 CENPOQ9BU64 300 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 CCDC86Q9H6F5 360 aaKnown RBP8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 NRIP3Q9NQ35 241 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 ERVK13-1Q9NX77 482 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms