RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 C18orf63Q68DL7 685 aa11.91□□□□□ -0.5
FOXN3-219ENST00000615335 PPP1R3BQ86XI6 285 aa11.91□□□□□ -0.5
FOXN3-219ENST00000615335 LNX2Q8N448 690 aa11.91□□□□□ -0.5
FOXN3-219ENST00000615335 CMKLR1Q99788 373 aa11.91□□□□□ -0.5
FOXN3-219ENST00000615335 SIDT1Q9NXL6 827 aaKnown RBP11.91□□□□□ -0.5
FOXN3-219ENST00000615335 RASL12Q9NYN1 266 aa11.91□□□□□ -0.5
FOXN3-219ENST00000615335 PPP4R1LQ9P1A2 415 aa11.91□□□□□ -0.5
FOXN3-219ENST00000615335 SLC13A4Q9UKG4 626 aa11.91□□□□□ -0.5
FOXN3-219ENST00000615335 CFAP54Q96N23 3096 aa11.91□□□□□ -0.5
FOXN3-219ENST00000615335 TRAPPC13A5PLN9 417 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 PGRMC2O15173 223 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 NSA2O95478 260 aaKnown RBP11.9□□□□□ -0.5
FOXN3-219ENST00000615335 AIFM1O95831 613 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 CNR1P21554 472 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 GALP22466 123 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 PAX6P26367 422 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 CCKBRP32239 447 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 GCGRP47871 477 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 PITPNAQ00169 270 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 PDZK1IP1Q13113 114 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 MRGPREQ86SM8 312 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 SIAH3Q8IW03 269 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 CCDC116Q8IYX3 515 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 OR56A1Q8NGH5 318 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 BARX1Q9HBU1 254 aaPredicted RBP11.9□□□□□ -0.5
FOXN3-219ENST00000615335 APMAPQ9HDC9 416 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 CARHSP1Q9Y2V2 147 aaKnown RBP11.9□□□□□ -0.5
FOXN3-219ENST00000615335 SPACA6W5XKT8 324 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 SPAARA0A1B0GVQ0 90 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 IMPA2O14732 288 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 LRRTM2O43300 516 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 SCRG1O75711 98 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 CCL4P13236 92 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 MST1P26927 711 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 TLX1P31314 330 aaPredicted RBP11.9□□□□□ -0.5
FOXN3-219ENST00000615335 SRP9P49458 86 aaKnown RBP11.9□□□□□ -0.5
FOXN3-219ENST00000615335 CCR6P51684 374 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 PSMA6P60900 246 aaKnown RBP11.9□□□□□ -0.5
FOXN3-219ENST00000615335 GMFBP60983 142 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 MAT1AQ00266 395 aaKnown RBP11.9□□□□□ -0.5
FOXN3-219ENST00000615335 TSPAN31Q12999 210 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 ZNF750Q32MQ0 723 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 ZNF311Q5JNZ3 666 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 FAM69AQ5T7M9 428 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 PRAMEF8Q5VWM4 474 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 PRAMEF7Q5VXH5 474 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 PWWP2BQ6NUJ5 590 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 SLC30A6Q6NXT4 461 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 MOB3CQ70IA8 216 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 NAA40Q86UY6 237 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 MARCH9Q86YJ5 346 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 MOAP1Q96BY2 351 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 C16orf58Q96GQ5 468 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 LURAP1Q96LR2 239 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 STRADBQ9C0K7 418 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 TMPRSS5Q9H3S3 457 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 LYRM4Q9HD34 91 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 KCNE3Q9Y6H6 103 aa11.9□□□□□ -0.5
FOXN3-219ENST00000615335 KDM4EB2RXH2 506 aaPredicted RBP11.89□□□□□ -0.51
FOXN3-219ENST00000615335 SYT5O00445 386 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 ARPC5O15511 151 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 CHST10O43529 356 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 NCR1O76036 304 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 IFNGR1P15260 489 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 SLC1A3P43003 542 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 SIM1P81133 766 aaPredicted RBP11.89□□□□□ -0.51
FOXN3-219ENST00000615335 SHC2P98077 582 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 IL11RAQ14626 422 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 ISXQ2M1V0 245 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 C9orf152Q5JTZ5 239 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 C10orf91Q5T1B1 145 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 C1orf189Q5VU69 101 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 HBMQ6B0K9 141 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 RPL13AP3Q6NVV1 102 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 SHISA5Q8N114 240 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 OR6V1Q8N148 313 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 CA13Q8N1Q1 262 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 PEX11GQ96HA9 241 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 MS4A4EQ96PG1 132 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 SSX3Q99909 188 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 ARHGAP9Q9BRR9 750 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 CNIH4Q9P003 139 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 COL27A1Q8IZC6 1860 aaPredicted RBP11.89□□□□□ -0.51
FOXN3-219ENST00000615335 C9orf170A2RU37 121 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 CPSF4LA6NMK7 179 aaKnown RBP11.89□□□□□ -0.51
FOXN3-219ENST00000615335 H0YIG0 161 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 TIAF1O95411 115 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 MT-CO3P00414 261 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 LIMS3P0CW19 117 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 LIMS4P0CW20 117 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 C8orf89P0DMQ9 161 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 SAGP10523 405 aaPredicted RBP11.89□□□□□ -0.51
FOXN3-219ENST00000615335 MUC1P15941 1255 aaPredicted RBP11.89□□□□□ -0.51
FOXN3-219ENST00000615335 OR1D4P47884 311 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 DUSP2Q05923 314 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 SNTB2Q13425 540 aaKnown RBP11.89□□□□□ -0.51
FOXN3-219ENST00000615335 TMEM255AQ5JRV8 349 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 CLEC12AQ5QGZ9 265 aa11.89□□□□□ -0.51
FOXN3-219ENST00000615335 YOD1Q5VVQ6 348 aaPredicted RBP11.89□□□□□ -0.51
FOXN3-219ENST00000615335 LIN54Q6MZP7 749 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms