RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 OR2T33Q8NG76 320 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 TMEM239Q8WW34 195 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 OR2M2Q96R28 347 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 P4HTMQ9NXG6 502 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 COMMD9Q9P000 198 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 RCE1Q9Y256 329 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 NPFFR2Q9Y5X5 522 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 FKBP7Q9Y680 259 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 TLN2Q9Y4G6 2542 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 OR14I1A6ND48 311 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 AGAP14A8MT82 685 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 YKT6O15498 198 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 ZNF264O43296 627 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 SERPINA3P01011 423 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 SLC35E2P0CK97 266 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 C21orf62-AS1Q17RA5 79 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 GAB4Q2WGN9 574 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 MFSD12Q6NUT3 480 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 ATRAIDQ6UW56 229 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 SLC35D2Q76EJ3 337 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 PRICKLE2Q7Z3G6 844 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 UBTD2Q8WUN7 234 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 ZNF845Q96IR2 970 aaPredicted RBP9.91□□□□□ -0.82
FAM3A-221ENST00000612856 LMF1Q96S06 567 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 AKIRIN1Q9H9L7 192 aaPredicted RBP9.91□□□□□ -0.82
FAM3A-221ENST00000612856 FBXO34Q9NWN3 711 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 PRKYO43930 277 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 SLC19A2O60779 497 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 ITGA10O75578 1167 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 ZP3P21754 424 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 AQP2P41181 271 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 OMPP47874 163 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 OR1Q1Q15612 314 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 ATP1A1-AS1Q5TC04 95 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 OLFML2AQ68BL7 652 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 PODNL1Q6PEZ8 512 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 PTOV1Q86YD1 416 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 LIX1LQ8IVB5 337 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 PM20D2Q8IYS1 436 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 ZNF101Q8IZC7 436 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 ZFPM2Q8WW38 1151 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 C3orf49Q96BT1 292 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 BPIFA2Q96DR5 249 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 HIST1H2AAQ96QV6 131 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 OR2A5Q96R48 311 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 PFDN5Q99471 154 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 CMSS1Q9BQ75 279 aaKnown RBP9.9□□□□□ -0.82
FAM3A-221ENST00000612856 TINAGL1Q9GZM7 467 aaPredicted RBP9.9□□□□□ -0.82
FAM3A-221ENST00000612856 VN1R1Q9GZP7 353 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 RXFP3Q9NSD7 469 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 ASF1BQ9NVP2 202 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 NUBP2Q9Y5Y2 271 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 VCANP13611 3396 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 NSA2O95478 260 aaKnown RBP9.9□□□□□ -0.82
FAM3A-221ENST00000612856 HK1P19367 917 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 CAPZA1P52907 286 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 STARD6P59095 220 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 TMPPEQ6ZT21 453 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 CCDC36Q8IYA8 594 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 CA13Q8N1Q1 262 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 NANOGP1Q8N7R0 232 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 OR52I1Q8NGK6 324 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 SPRYD4Q8WW59 207 aaPredicted RBP9.9□□□□□ -0.82
FAM3A-221ENST00000612856 LINC00615Q96LM1 132 aaPredicted RBP9.9□□□□□ -0.82
FAM3A-221ENST00000612856 ORAI3Q9BRQ5 295 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 GABARAPL1Q9H0R8 117 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 NAV3Q8IVL0 2385 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 UNC119BA6NIH7 251 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 STMND1H3BQB6 276 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 SLC16A7O60669 478 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 FABP1P07148 127 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 ADRB1P08588 477 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 SNRPBP14678 240 aaKnown RBP9.9□□□□□ -0.82
FAM3A-221ENST00000612856 PSMA3P25788 255 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 ST3GAL2Q16842 350 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 ALG10Q5BKT4 473 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 BATF2Q8N1L9 274 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 OR8S1Q8NH09 359 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 OR4C3Q8NH37 302 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 TMEM163Q8TC26 289 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 WNT2BQ93097 391 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 SLC35A4Q96G79 324 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 FER1L6-AS2Q96M78 137 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 ADAT1Q9BUB4 502 aaKnown RBP9.9□□□□□ -0.82
FAM3A-221ENST00000612856 GABARAPL3Q9BY60 117 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 NKX6-2Q9C056 277 aaPredicted RBP9.9□□□□□ -0.82
FAM3A-221ENST00000612856 MFFQ9GZY8 342 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 NDUFB11Q9NX14 153 aa9.9□□□□□ -0.82
FAM3A-221ENST00000612856 SLC22A23A1A5C7 686 aa9.9□□□□□ -0.83
FAM3A-221ENST00000612856 CHRM4P08173 479 aa9.9□□□□□ -0.83
FAM3A-221ENST00000612856 DGCR2P98153 550 aa9.9□□□□□ -0.83
FAM3A-221ENST00000612856 PLP2Q04941 152 aa9.9□□□□□ -0.83
FAM3A-221ENST00000612856 MEDAGQ5VYS4 303 aa9.9□□□□□ -0.83
FAM3A-221ENST00000612856 FCRL1Q96LA6 429 aa9.9□□□□□ -0.83
FAM3A-221ENST00000612856 VSX1Q9NZR4 365 aaPredicted RBP9.9□□□□□ -0.83
FAM3A-221ENST00000612856 RALYQ9UKM9 306 aaKnown RBP9.9□□□□□ -0.83
FAM3A-221ENST00000612856 MRPS18BQ9Y676 258 aaKnown RBP9.9□□□□□ -0.83
FAM3A-221ENST00000612856 CCDC88CQ9P219 2028 aa9.89□□□□□ -0.83
FAM3A-221ENST00000612856 CREBL2O60519 120 aaPredicted RBP9.89□□□□□ -0.83
FAM3A-221ENST00000612856 ITGA5P08648 1049 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms