RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 HERVK_113Q902F9 699 aa18.52■□□□□ 0.56
SSBP3-216ENST00000610401 HIST1H2ACQ93077 130 aa18.52■□□□□ 0.56
SSBP3-216ENST00000610401 CMBLQ96DG6 245 aa18.52■□□□□ 0.56
SSBP3-216ENST00000610401 TM4SF19Q96DZ7 209 aa18.52■□□□□ 0.56
SSBP3-216ENST00000610401 SMIM10Q96HG1 83 aa18.52■□□□□ 0.56
SSBP3-216ENST00000610401 CMKLR1Q99788 373 aa18.52■□□□□ 0.56
SSBP3-216ENST00000610401 ELOVL3Q9HB03 270 aa18.52■□□□□ 0.56
SSBP3-216ENST00000610401 ZNF337Q9Y3M9 751 aa18.52■□□□□ 0.56
SSBP3-216ENST00000610401 UPK3AO75631 287 aa18.52■□□□□ 0.56
SSBP3-216ENST00000610401 NKX2-2O95096 273 aa18.52■□□□□ 0.56
SSBP3-216ENST00000610401 STARP49675 285 aa18.52■□□□□ 0.56
SSBP3-216ENST00000610401 LUMP51884 338 aaPredicted RBP18.52■□□□□ 0.56
SSBP3-216ENST00000610401 RBMS2Q15434 407 aaKnown RBP18.52■□□□□ 0.56
SSBP3-216ENST00000610401 TOMM34Q15785 309 aaPredicted RBP18.52■□□□□ 0.56
SSBP3-216ENST00000610401 PRAMEF17Q5VTA0 474 aa18.52■□□□□ 0.56
SSBP3-216ENST00000610401 LRFN4Q6PJG9 635 aa18.52■□□□□ 0.56
SSBP3-216ENST00000610401 MED25Q71SY5 747 aa18.52■□□□□ 0.56
SSBP3-216ENST00000610401 ZNF546Q86UE3 836 aa18.52■□□□□ 0.56
SSBP3-216ENST00000610401 BCORP1Q8N888 145 aa18.52■□□□□ 0.56
SSBP3-216ENST00000610401 NT5CQ8TCD5 201 aa18.52■□□□□ 0.56
SSBP3-216ENST00000610401 WBP1Q96G27 269 aa18.52■□□□□ 0.56
SSBP3-216ENST00000610401 LPAR4Q99677 370 aa18.52■□□□□ 0.56
SSBP3-216ENST00000610401 ZNF471Q9BX82 626 aaPredicted RBP18.52■□□□□ 0.56
SSBP3-216ENST00000610401 CPNE7Q9UBL6 633 aa18.52■□□□□ 0.56
SSBP3-216ENST00000610401 EML5Q05BV3 1969 aa18.52■□□□□ 0.56
SSBP3-216ENST00000610401 C2orf72A6NCS6 295 aa18.52■□□□□ 0.55
SSBP3-216ENST00000610401 FAM74A7A6NL05 159 aa18.52■□□□□ 0.55
SSBP3-216ENST00000610401 GLSO94925 669 aaPredicted RBP18.52■□□□□ 0.55
SSBP3-216ENST00000610401 WNT11O96014 354 aa18.52■□□□□ 0.55
SSBP3-216ENST00000610401 GABRA1P14867 456 aa18.52■□□□□ 0.55
SSBP3-216ENST00000610401 RPL18Q07020 188 aaKnown RBP18.52■□□□□ 0.55
SSBP3-216ENST00000610401 SLC22A6Q4U2R8 563 aa18.52■□□□□ 0.55
SSBP3-216ENST00000610401 FAM74A3Q4VXF1 159 aa18.52■□□□□ 0.55
SSBP3-216ENST00000610401 KCTD9Q7L273 389 aa18.52■□□□□ 0.55
SSBP3-216ENST00000610401 GALNT16Q8N428 558 aa18.52■□□□□ 0.55
SSBP3-216ENST00000610401 ACBD4Q8NC06 268 aa18.52■□□□□ 0.55
SSBP3-216ENST00000610401 OR10K1Q8NGX5 313 aa18.52■□□□□ 0.55
SSBP3-216ENST00000610401 RNF166Q96A37 237 aaPredicted RBP18.52■□□□□ 0.55
SSBP3-216ENST00000610401 CCDC74AQ96AQ1 378 aa18.52■□□□□ 0.55
SSBP3-216ENST00000610401 WDR92Q96MX6 357 aa18.52■□□□□ 0.55
SSBP3-216ENST00000610401 COMMD4Q9H0A8 199 aa18.52■□□□□ 0.55
SSBP3-216ENST00000610401 LHX6Q9UPM6 363 aa18.52■□□□□ 0.55
SSBP3-216ENST00000610401 A0A087WUJ7 227 aa18.51■□□□□ 0.55
SSBP3-216ENST00000610401 SERINC4A6NH21 518 aa18.51■□□□□ 0.55
SSBP3-216ENST00000610401 GNRH1P01148 92 aa18.51■□□□□ 0.55
SSBP3-216ENST00000610401 RAG2P55895 527 aa18.51■□□□□ 0.55
SSBP3-216ENST00000610401 KIR2DS3Q14952 304 aa18.51■□□□□ 0.55
SSBP3-216ENST00000610401 AKIRIN2Q53H80 203 aa18.51■□□□□ 0.55
SSBP3-216ENST00000610401 ZNF660Q6AZW8 331 aaPredicted RBP18.51■□□□□ 0.55
SSBP3-216ENST00000610401 PRSS35Q8N3Z0 413 aa18.51■□□□□ 0.55
SSBP3-216ENST00000610401 OR51A2Q8NGJ7 313 aa18.51■□□□□ 0.55
SSBP3-216ENST00000610401 SLC37A2Q8TED4 501 aa18.51■□□□□ 0.55
SSBP3-216ENST00000610401 NOP16Q9Y3C1 178 aaKnown RBP18.51■□□□□ 0.55
SSBP3-216ENST00000610401 OR6A2O95222 327 aa18.51■□□□□ 0.55
SSBP3-216ENST00000610401 TACSTD2P09758 323 aa18.51■□□□□ 0.55
SSBP3-216ENST00000610401 PBX2P40425 430 aa18.51■□□□□ 0.55
SSBP3-216ENST00000610401 GPR143P51810 404 aa18.51■□□□□ 0.55
SSBP3-216ENST00000610401 NUDT18Q6ZVK8 323 aa18.51■□□□□ 0.55
SSBP3-216ENST00000610401 FAM71CQ8NEG0 241 aa18.51■□□□□ 0.55
SSBP3-216ENST00000610401 DGAT2Q96PD7 388 aa18.51■□□□□ 0.55
SSBP3-216ENST00000610401 WDR13Q9H1Z4 485 aa18.51■□□□□ 0.55
SSBP3-216ENST00000610401 IGKV1D-42A0A075B6H8 117 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 OR2M5A3KFT3 312 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 GGT3PA6NGU5 568 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 CTDSPLO15194 276 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 GPRIN2O60269 458 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 CTAG2O75638 210 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 CT45A8P0DMV1 189 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 CT45A9P0DMV2 189 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 C4BPBP20851 252 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 ZP3P21754 424 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 FCARP24071 287 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 BIKQ13323 160 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 GPM6BQ13491 265 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 ALG11Q2TAA5 492 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 CT45A2Q5DJT8 189 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 WDR38Q5JTN6 314 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 UNQ9370/PRO34162Q6UXP9 181 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 BAIAP2L2Q6UXY1 529 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 BEST3Q8N1M1 668 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 OR1J2Q8NGS2 313 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 OR1S1Q8NH92 325 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 GPR89AB7ZAQ6 455 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 K7EQS6 105 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 LMX1BO60663 402 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 GPR89BP0CG08 455 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 PRSS3P35030 304 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 ILF3Q12906 894 aaKnown RBP eCLIP18.5■□□□□ 0.554e-9■□□□□ 9.1
SSBP3-216ENST00000610401 GLYATL3Q5SZD4 288 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 CHRDL2Q6WN34 429 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 Q6ZSR6 202 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 ZNF550Q7Z398 422 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 TOE1Q96GM8 510 aaKnown RBP18.5■□□□□ 0.55
SSBP3-216ENST00000610401 TMEM235A6NFC5 223 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 HCRTR2O43614 444 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 PNPP00491 289 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 VAMP1P23763 118 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 MAP3K8P41279 467 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 RTN4RL2Q86UN3 420 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 CHST4Q8NCG5 386 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms