RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 REEP1Q9H902 201 aa12.42□□□□□ -0.42
TUBE1-211ENST00000605457 ST6GALNAC2Q9UJ37 374 aa12.42□□□□□ -0.42
TUBE1-211ENST00000605457 SAMHD1Q9Y3Z3 626 aaKnown RBP12.42□□□□□ -0.42
TUBE1-211ENST00000605457 RNF115Q9Y4L5 304 aa12.42□□□□□ -0.42
TUBE1-211ENST00000605457 U3KQV3 271 aa12.42□□□□□ -0.42
TUBE1-211ENST00000605457 PRRC2AP48634 2157 aaKnown RBP12.42□□□□□ -0.42
TUBE1-211ENST00000605457 ZNF503-AS2A6NEH8 195 aa12.41□□□□□ -0.42
TUBE1-211ENST00000605457 DHHO43323 396 aa12.41□□□□□ -0.42
TUBE1-211ENST00000605457 CST1P01037 141 aa12.41□□□□□ -0.42
TUBE1-211ENST00000605457 CD3EP07766 207 aa12.41□□□□□ -0.42
TUBE1-211ENST00000605457 QDPRP09417 244 aa12.41□□□□□ -0.42
TUBE1-211ENST00000605457 B4GALT1P15291 398 aa12.41□□□□□ -0.42
TUBE1-211ENST00000605457 ACVR1BP36896 505 aa12.41□□□□□ -0.42
TUBE1-211ENST00000605457 ERFP50548 548 aa12.41□□□□□ -0.42
TUBE1-211ENST00000605457 UBE2NP61088 152 aaKnown RBP12.41□□□□□ -0.42
TUBE1-211ENST00000605457 ERVK-25P63136 954 aa12.41□□□□□ -0.42
TUBE1-211ENST00000605457 MYBPC1Q00872 1141 aa12.41□□□□□ -0.42
TUBE1-211ENST00000605457 KLHL17Q6TDP4 642 aa12.41□□□□□ -0.42
TUBE1-211ENST00000605457 TMEM108Q6UXF1 575 aa12.41□□□□□ -0.42
TUBE1-211ENST00000605457 LINC00471Q8N535 108 aa12.41□□□□□ -0.42
TUBE1-211ENST00000605457 FANK1Q8TC84 345 aa12.41□□□□□ -0.42
TUBE1-211ENST00000605457 MCHR2Q969V1 340 aa12.41□□□□□ -0.42
TUBE1-211ENST00000605457 NMD3Q96D46 503 aaKnown RBP12.41□□□□□ -0.42
TUBE1-211ENST00000605457 C1QTNF6Q9BXI9 259 aa12.41□□□□□ -0.42
TUBE1-211ENST00000605457 NDEL1Q9GZM8 345 aa12.41□□□□□ -0.42
TUBE1-211ENST00000605457 IL20RAQ9UHF4 553 aa12.41□□□□□ -0.42
TUBE1-211ENST00000605457 POFUT2Q9Y2G5 429 aa12.41□□□□□ -0.42
TUBE1-211ENST00000605457 USF3Q68DE3 2245 aa12.41□□□□□ -0.42
TUBE1-211ENST00000605457 EBAG9O00559 213 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 ABCD4O14678 606 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 PTAFRP25105 342 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 CD40P25942 277 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 TUBA1BP68363 451 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 TUBA4AP68366 448 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 FMODQ06828 376 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 CD47Q08722 323 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 TSPAN31Q12999 210 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 GK3PQ14409 553 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 C10orf128Q5T292 105 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 ADAM5Q6NVV9 412 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 SMARCD3Q6STE5 483 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 ZNF813Q6ZN06 617 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 TUBA1AQ71U36 451 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 CLDN22Q8N7P3 220 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 ARIH2OSQ8N7S6 290 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 PAPD5Q8NDF8 572 aaKnown RBP12.4□□□□□ -0.42
TUBE1-211ENST00000605457 KBTBD8Q8NFY9 601 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 SLCO4A1Q96BD0 722 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 Q96M85 177 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 ALG12Q9BV10 488 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 OR52D1Q9H346 318 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 SMURF2Q9HAU4 748 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 NRIP3Q9NQ35 241 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 CCM2LQ9NUG4 571 aaPredicted RBP12.4□□□□□ -0.42
TUBE1-211ENST00000605457 TMEM38BQ9NVV0 291 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 ITPR3Q14573 2671 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 A6NIZ1 184 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 M0R1B8 84 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 FKBP6O75344 327 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 CCNB2O95067 398 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 SLC2A10O95528 541 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 NR2C1P13056 603 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 PAX7P23759 505 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 RAP1BP61224 184 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 RAP1AP62834 184 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 SPOCK1Q08629 439 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 MESTQ5EB52 335 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 C1orf146Q5VVC0 180 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 ZNF620Q6ZNG0 422 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 CCDC36Q8IYA8 594 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 LILRB1Q8NHL6 650 aaPredicted RBP12.4□□□□□ -0.42
TUBE1-211ENST00000605457 GNPDA2Q8TDQ7 276 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 NINJ1Q92982 152 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 UTP4Q969X6 686 aaKnown RBP12.4□□□□□ -0.42
TUBE1-211ENST00000605457 ZNF570Q96NI8 536 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 UBTD1Q9HAC8 227 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 MOV10Q9HCE1 1003 aaKnown RBP12.4□□□□□ -0.42
TUBE1-211ENST00000605457 ZNF224Q9NZL3 707 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 CRNNQ9UBG3 495 aaPredicted RBP12.4□□□□□ -0.42
TUBE1-211ENST00000605457 GRHPRQ9UBQ7 328 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 PLEKHA6Q9Y2H5 1048 aa12.4□□□□□ -0.42
TUBE1-211ENST00000605457 IGKV1D-43A0A0B4J1Z2 117 aa12.39□□□□□ -0.43
TUBE1-211ENST00000605457 SHISA9B4DS77 424 aa12.39□□□□□ -0.43
TUBE1-211ENST00000605457 HS3ST1O14792 307 aa12.39□□□□□ -0.43
TUBE1-211ENST00000605457 IGKV3-15P01624 115 aa12.39□□□□□ -0.43
TUBE1-211ENST00000605457 IGLV1-44P01699 117 aa12.39□□□□□ -0.43
TUBE1-211ENST00000605457 SDHAP31040 664 aa12.39□□□□□ -0.43
TUBE1-211ENST00000605457 IST1P53990 364 aa12.39□□□□□ -0.43
TUBE1-211ENST00000605457 MICAQ29983 383 aa12.39□□□□□ -0.43
TUBE1-211ENST00000605457 C3orf36Q3SXR2 165 aa12.39□□□□□ -0.43
TUBE1-211ENST00000605457 GPR139Q6DWJ6 353 aa12.39□□□□□ -0.43
TUBE1-211ENST00000605457 DPY19L2P2Q6ZN68 376 aa12.39□□□□□ -0.43
TUBE1-211ENST00000605457 SLC22A24Q8N4F4 322 aa12.39□□□□□ -0.43
TUBE1-211ENST00000605457 FAM169BQ8N8A8 192 aa12.39□□□□□ -0.43
TUBE1-211ENST00000605457 AQP11Q8NBQ7 271 aa12.39□□□□□ -0.43
TUBE1-211ENST00000605457 FNDC8Q8TC99 324 aa12.39□□□□□ -0.43
TUBE1-211ENST00000605457 RASD2Q96D21 266 aa12.39□□□□□ -0.43
TUBE1-211ENST00000605457 SLC38A2Q96QD8 506 aa12.39□□□□□ -0.43
TUBE1-211ENST00000605457 YY1AP1Q9H869 796 aa12.39□□□□□ -0.43
TUBE1-211ENST00000605457 B3GNT2Q9NY97 397 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms