RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 CDKN2AP42771 156 aaKnown RBP12.03□□□□□ -0.48
VRK3-219ENST00000600137 DAPP51397 102 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 MYBPC1Q00872 1141 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 FMODQ06828 376 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 COX10Q12887 443 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 TOP3AQ13472 1001 aaPredicted RBP12.03□□□□□ -0.48
VRK3-219ENST00000600137 TBRG1Q3YBR2 411 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 HIKESHIQ53FT3 197 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 C10orf128Q5T292 105 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 OR7E24Q6IFN5 339 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 FAHD1Q6P587 224 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 ABHD12BQ7Z5M8 362 aaPredicted RBP12.03□□□□□ -0.48
VRK3-219ENST00000600137 P2RY8Q86VZ1 359 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 NOXO1Q8NFA2 376 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 OR5K1Q8NHB7 308 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 FANK1Q8TC84 345 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 MAGEE2Q8TD90 523 aaPredicted RBP12.03□□□□□ -0.48
VRK3-219ENST00000600137 HSD17B8Q92506 261 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 RASD2Q96D21 266 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 ZC3HAV1LQ96H79 300 aaKnown RBP12.03□□□□□ -0.48
VRK3-219ENST00000600137 MED18Q9BUE0 208 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 ALG12Q9BV10 488 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 POLDIP3Q9BY77 421 aaKnown RBP12.03□□□□□ -0.48
VRK3-219ENST00000600137 ULBP2Q9BZM5 246 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 SLC24A3Q9HC58 644 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 ZNF224Q9NZL3 707 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 UGT2A1Q9Y4X1 527 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 CDH10Q9Y6N8 788 aa12.03□□□□□ -0.48
VRK3-219ENST00000600137 TEX13CA0A0J9YWL9 993 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 A0A1W2PR80 420 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 SLC22A23A1A5C7 686 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 A6NNC1 897 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 ZNF99A8MXY4 864 aaPredicted RBP12.02□□□□□ -0.49
VRK3-219ENST00000600137 ARHGEF9O43307 516 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 KRT33AO76009 404 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 SLC2A10O95528 541 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 PPP1R3DO95685 299 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 HRGP04196 525 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 ANXA8P13928 327 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 CDH2P19022 906 aaPredicted RBP12.02□□□□□ -0.49
VRK3-219ENST00000600137 GSTM3P21266 225 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 SDHAP31040 664 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 SLC6A6P31641 620 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 SH3BGRP55822 239 aaPredicted RBP12.02□□□□□ -0.49
VRK3-219ENST00000600137 KRTAP10-9P60411 292 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 TGFBR3Q03167 851 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 FAM205BPQ63HN1 556 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 GPR139Q6DWJ6 353 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 ANKRD16Q6P6B7 361 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 C17orf78Q8N4C9 275 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 OR4Q3Q8NH05 313 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 CENPNQ96H22 339 aaPredicted RBP12.02□□□□□ -0.49
VRK3-219ENST00000600137 ZNF75AQ96N20 296 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 BDH2Q9BUT1 245 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 S100A14Q9HCY8 104 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 B3GNT2Q9NY97 397 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 VSX1Q9NZR4 365 aaPredicted RBP12.02□□□□□ -0.49
VRK3-219ENST00000600137 GRHPRQ9UBQ7 328 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 AKAP6Q13023 2319 aa12.02□□□□□ -0.49
VRK3-219ENST00000600137 A0A096LPE4 126 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 ARPC4-TTLL3A0A0A6YYG9 625 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 A0A1W2PPZ6 126 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 PRSS37A4D1T9 235 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 DPRXA6NFQ7 191 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 A6NIZ1 184 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 H7C1C5 153 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 E2F6O75461 281 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 SEC14L2O76054 403 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 SCG5P05408 212 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 FCGR1AP12314 374 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 HOXB1P14653 301 aaPredicted RBP12.01□□□□□ -0.49
VRK3-219ENST00000600137 HIST1H1CP16403 213 aaKnown RBP12.01□□□□□ -0.49
VRK3-219ENST00000600137 CLRN1P58418 232 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 RAP1BP61224 184 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 LCN6P62502 163 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 RAP1AP62834 184 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 DBPQ10586 325 aaPredicted RBP12.01□□□□□ -0.49
VRK3-219ENST00000600137 ETFDHQ16134 617 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 THEM4Q5T1C6 240 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 ZFP1Q6P2D0 407 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 FOXL2NBQ6ZUU3 175 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 WFDC8Q8IUA0 241 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 LNX2Q8N448 690 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 OR52N5Q8NH56 324 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 FGFBP3Q8TAT2 258 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 HTRA1Q92743 480 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 ZNF570Q96NI8 536 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 ERMAPQ96PL5 475 aaPredicted RBP12.01□□□□□ -0.49
VRK3-219ENST00000600137 HS3ST6Q96QI5 342 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 FOXB1Q99853 325 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 GABARAPL1Q9H0R8 117 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 SEMA6AQ9H2E6 1030 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 SMURF2Q9HAU4 748 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 B3GAT2Q9NPZ5 323 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 RASSF1Q9NS23 344 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 TMEM38BQ9NVV0 291 aa12.01□□□□□ -0.49
VRK3-219ENST00000600137 STX18Q9P2W9 335 aaKnown RBP12.01□□□□□ -0.49
VRK3-219ENST00000600137 TMEFF2Q9UIK5 374 aaPredicted RBP12.01□□□□□ -0.49
VRK3-219ENST00000600137 HEATR1Q9H583 2144 aaKnown RBP12.01□□□□□ -0.49
VRK3-219ENST00000600137 NOTCH2Q04721 2471 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms