RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 ATP6V1G1O75348 118 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 UPK3AO75631 287 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 RPP14O95059 124 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 ALOX5APP20292 161 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 AZGP1P25311 298 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 MAP2K6P52564 334 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 MADCAM1Q13477 382 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 RPS4Y2Q8TD47 263 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 DIRAS2Q96HU8 199 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 KLHL15Q96M94 604 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 ANGPTL4Q9BY76 406 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 LAMP5Q9UJQ1 280 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 FARSAQ9Y285 508 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 SDK2Q58EX2 2172 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 SPTBN2O15020 2390 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 HPGDSO60760 199 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 CENPAP49450 140 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 POU3F1Q03052 451 aaPredicted RBP15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 EIF3IQ13347 325 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 LIPNQ5VXI9 398 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 TMEM81Q6P7N7 255 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 PLCZ1Q86YW0 608 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 ARMC10Q8N2F6 343 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 TMEM156Q8N614 296 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 ZNF248Q8NDW4 579 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 PAQR8Q8TEZ7 354 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 ASB10Q8WXI3 467 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 NTNG2Q96CW9 530 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 TXNDC15Q96J42 360 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 SMAD5Q99717 465 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 SRRQ9GZT4 340 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 TBCCD1Q9NVR7 557 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 MRPL22Q9NWU5 206 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 MED29Q9NX70 200 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 ALKBH4Q9NXW9 302 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 KCNG2Q9UJ96 466 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 A0A0G2JK05 382 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 A0A1W2PNR3 127 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 HLA-DQA2P01906 255 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 CD1AP06126 327 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 CD63P08962 238 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 RAB40ALP0C0E4 278 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 HSF1Q00613 529 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 B3GNTL1Q67FW5 361 aaPredicted RBP15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 C3orf33Q6P1S2 294 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 FAM131AQ6UXB0 335 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 LRRC69Q6ZNQ3 347 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 YIPF7Q8N8F6 280 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 POC5Q8NA72 575 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 TEX19Q8NA77 164 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 THEM6Q8WUY1 208 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 C5orf34Q96MH7 638 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 OR14A2Q96R54 314 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 CCDC32Q9BV29 185 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 PTGES2Q9H7Z7 377 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 SERINC1Q9NRX5 453 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 B3GAT1Q9P2W7 334 aa15.28■□□□□ 0.04
SHKBP1-216ENST00000598201 A0A1B0GTH9 108 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 NPIPA5E9PKD4 350 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 ZNF593O00488 134 aaPredicted RBP15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 ZFPL1O95159 310 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 MYL9P24844 172 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 SSPNQ14714 243 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 BAK1Q16611 211 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 MEP1BQ16820 701 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 IDNKQ5T6J7 187 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 SLC35D2Q76EJ3 337 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 MDGA2Q7Z553 956 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 KCTD20Q7Z5Y7 419 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 SYT9Q86SS6 491 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 OR8H2Q8N162 312 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 MINDY2Q8NBR6 621 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 OTOSQ8NHW6 89 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 RGP1Q92546 391 aaPredicted RBP15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 MAP6Q96JE9 813 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 GNRHR2Q96P88 292 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 TIGARQ9NQ88 270 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 HPF1Q9NWY4 346 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 RHBDL2Q9NX52 303 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 ANKRD10Q9NXR5 420 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 NPIPA1Q9UND3 350 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 B3GALT5Q9Y2C3 310 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 RPH3AQ9Y2J0 694 aaPredicted RBP15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 AHCTF1Q8WYP5 2266 aa15.27■□□□□ 0.03
SHKBP1-216ENST00000598201 FUOMA2VDF0 154 aa15.26■□□□□ 0.03
SHKBP1-216ENST00000598201 FABP12A6NFH5 140 aa15.26■□□□□ 0.03
SHKBP1-216ENST00000598201 FZD7O75084 574 aa15.26■□□□□ 0.03
SHKBP1-216ENST00000598201 SERPINA3P01011 423 aa15.26■□□□□ 0.03
SHKBP1-216ENST00000598201 THBS2P35442 1172 aa15.26■□□□□ 0.03
SHKBP1-216ENST00000598201 MAGEB1P43366 347 aa15.26■□□□□ 0.03
SHKBP1-216ENST00000598201 PPP3R1P63098 170 aa15.26■□□□□ 0.03
SHKBP1-216ENST00000598201 FMODQ06828 376 aa15.26■□□□□ 0.03
SHKBP1-216ENST00000598201 SLC22A10Q63ZE4 541 aa15.26■□□□□ 0.03
SHKBP1-216ENST00000598201 NHLRC1Q6VVB1 395 aa15.26■□□□□ 0.03
SHKBP1-216ENST00000598201 SNRNP27Q8WVK2 155 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-216ENST00000598201 OR5B2Q96R09 309 aa15.26■□□□□ 0.03
SHKBP1-216ENST00000598201 IKZF2Q9UKS7 526 aa15.26■□□□□ 0.03
SHKBP1-216ENST00000598201 COA3Q9Y2R0 106 aaPredicted RBP15.26■□□□□ 0.03
SHKBP1-216ENST00000598201 IGKV1D-43A0A0B4J1Z2 117 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms