RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 DHFR2Q86XF0 187 aa14.56□□□□□ -0.08
SSBP4-204ENST00000597724 TGIF2LYQ8IUE0 185 aa14.56□□□□□ -0.08
SSBP4-204ENST00000597724 KRTAP1-3Q8IUG1 177 aa14.56□□□□□ -0.08
SSBP4-204ENST00000597724 ZDHHC21Q8IVQ6 265 aa14.56□□□□□ -0.08
SSBP4-204ENST00000597724 NOXO1Q8NFA2 376 aa14.56□□□□□ -0.08
SSBP4-204ENST00000597724 MCHR2Q969V1 340 aa14.56□□□□□ -0.08
SSBP4-204ENST00000597724 NMD3Q96D46 503 aaKnown RBP14.56□□□□□ -0.08
SSBP4-204ENST00000597724 CLPTM1LQ96KA5 538 aa14.56□□□□□ -0.08
SSBP4-204ENST00000597724 KCNK17Q96T54 332 aa14.56□□□□□ -0.08
SSBP4-204ENST00000597724 DHRS9Q9BPW9 319 aa14.56□□□□□ -0.08
SSBP4-204ENST00000597724 KATNB1Q9BVA0 655 aa14.56□□□□□ -0.08
SSBP4-204ENST00000597724 GSX2Q9BZM3 304 aa14.56□□□□□ -0.08
SSBP4-204ENST00000597724 GRIP2Q9C0E4 1043 aa14.56□□□□□ -0.08
SSBP4-204ENST00000597724 CXorf56Q9H5V9 222 aa14.56□□□□□ -0.08
SSBP4-204ENST00000597724 ZNF701Q9NV72 531 aaPredicted RBP14.56□□□□□ -0.08
SSBP4-204ENST00000597724 ZNF224Q9NZL3 707 aa14.56□□□□□ -0.08
SSBP4-204ENST00000597724 MOKQ9UQ07 419 aa14.56□□□□□ -0.08
SSBP4-204ENST00000597724 VPS13CQ709C8 3753 aa14.56□□□□□ -0.08
SSBP4-204ENST00000597724 FLNAP21333 2647 aaKnown RBP14.56□□□□□ -0.08
SSBP4-204ENST00000597724 SH3PXD2BA1X283 911 aa14.55□□□□□ -0.08
SSBP4-204ENST00000597724 ATP6V1G2-DDX39BF2Z307 99 aa14.55□□□□□ -0.08
SSBP4-204ENST00000597724 OVOL3O00110 214 aa14.55□□□□□ -0.08
SSBP4-204ENST00000597724 PTP4A3O75365 173 aa14.55□□□□□ -0.08
SSBP4-204ENST00000597724 CD8AP01732 235 aa14.55□□□□□ -0.08
SSBP4-204ENST00000597724 HLA-HP01893 362 aa14.55□□□□□ -0.08
SSBP4-204ENST00000597724 CECR9P0C854 216 aa14.55□□□□□ -0.08
SSBP4-204ENST00000597724 ZNF26P17031 533 aaPredicted RBP14.55□□□□□ -0.08
SSBP4-204ENST00000597724 CAPZA2P47755 286 aa14.55□□□□□ -0.08
SSBP4-204ENST00000597724 LIMS1P48059 325 aa14.55□□□□□ -0.08
SSBP4-204ENST00000597724 MYBPC1Q00872 1141 aa14.55□□□□□ -0.08
SSBP4-204ENST00000597724 SPIBQ01892 262 aa14.55□□□□□ -0.08
SSBP4-204ENST00000597724 NAAAQ02083 359 aa14.55□□□□□ -0.08
SSBP4-204ENST00000597724 DTX2Q86UW9 622 aa14.55□□□□□ -0.08
SSBP4-204ENST00000597724 MDP1Q86V88 176 aa14.55□□□□□ -0.08
SSBP4-204ENST00000597724 MYPOPQ86VE0 399 aaPredicted RBP14.55□□□□□ -0.08
SSBP4-204ENST00000597724 SLC22A24Q8N4F4 322 aa14.55□□□□□ -0.08
SSBP4-204ENST00000597724 HDAC2Q92769 488 aaKnown RBP14.55□□□□□ -0.08
SSBP4-204ENST00000597724 ASB9Q96DX5 294 aa14.55□□□□□ -0.08
SSBP4-204ENST00000597724 TSPAN32Q96QS1 320 aa14.55□□□□□ -0.08
SSBP4-204ENST00000597724 THTPAQ9BU02 230 aa14.55□□□□□ -0.08
SSBP4-204ENST00000597724 TRAF4Q9BUZ4 470 aaPredicted RBP14.55□□□□□ -0.08
SSBP4-204ENST00000597724 SEC61A2Q9H9S3 476 aa14.55□□□□□ -0.08
SSBP4-204ENST00000597724 FAIMQ9NVQ4 179 aa14.55□□□□□ -0.08
SSBP4-204ENST00000597724 TMEM38BQ9NVV0 291 aa14.55□□□□□ -0.08
SSBP4-204ENST00000597724 SIGLEC7Q9Y286 467 aa14.55□□□□□ -0.08
SSBP4-204ENST00000597724 ATP23Q9Y6H3 246 aa14.55□□□□□ -0.08
SSBP4-204ENST00000597724 ARHGEF9O43307 516 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 CRYAAP02489 173 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 CELA3BP08861 270 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 OR8G3PP0DMU2 310 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 CD79AP11912 226 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 TTKP33981 857 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 ACVR1BP36896 505 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 MAGEA2P43356 314 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 PTH2RP49190 550 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 IDH3GP51553 393 aaPredicted RBP14.54□□□□□ -0.08
SSBP4-204ENST00000597724 PIGFQ07326 219 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 TOP3AQ13472 1001 aaPredicted RBP14.54□□□□□ -0.08
SSBP4-204ENST00000597724 GSG1Q2KHT4 349 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 C10orf128Q5T292 105 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 AGAP6Q5VW22 663 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 SHEQ5VZ18 495 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 SKA3Q8IX90 412 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 ARIH2OSQ8N7S6 290 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 WFDC11Q8NEX6 87 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 ZNF519Q8TB69 540 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 SLC7A6OSQ96CW6 309 aaPredicted RBP14.54□□□□□ -0.08
SSBP4-204ENST00000597724 PERPQ96FX8 193 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 ZNF75AQ96N20 296 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 GPA33Q99795 319 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 DENND2DQ9H6A0 471 aaPredicted RBP14.54□□□□□ -0.08
SSBP4-204ENST00000597724 SMURF2Q9HAU4 748 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 NOX3Q9HBY0 568 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 KRCC1Q9NPI7 259 aaPredicted RBP14.54□□□□□ -0.08
SSBP4-204ENST00000597724 MED13LQ71F56 2210 aa14.54□□□□□ -0.08
SSBP4-204ENST00000597724 A6NIZ1 184 aa14.53□□□□□ -0.08
SSBP4-204ENST00000597724 ACOT8O14734 319 aa14.53□□□□□ -0.08
SSBP4-204ENST00000597724 GYG2O15488 501 aa14.53□□□□□ -0.08
SSBP4-204ENST00000597724 ENTPD5O75356 428 aa14.53□□□□□ -0.08
SSBP4-204ENST00000597724 UBL3O95164 117 aa14.53□□□□□ -0.08
SSBP4-204ENST00000597724 CD14P08571 375 aa14.53□□□□□ -0.08
SSBP4-204ENST00000597724 NR2C1P13056 603 aa14.53□□□□□ -0.08
SSBP4-204ENST00000597724 RRM2P31350 389 aa14.53□□□□□ -0.08
SSBP4-204ENST00000597724 RPL4P36578 427 aaKnown RBP14.53□□□□□ -0.08
SSBP4-204ENST00000597724 FABP6P51161 128 aa14.53□□□□□ -0.08
SSBP4-204ENST00000597724 ZNF84P51523 738 aa14.53□□□□□ -0.08
SSBP4-204ENST00000597724 RAP1BP61224 184 aa14.53□□□□□ -0.08
SSBP4-204ENST00000597724 RAB1AP62820 205 aa14.53□□□□□ -0.08
SSBP4-204ENST00000597724 RAP1AP62834 184 aa14.53□□□□□ -0.08
SSBP4-204ENST00000597724 ERVK-25P63136 954 aa14.53□□□□□ -0.08
SSBP4-204ENST00000597724 NPRL3Q12980 569 aa14.53□□□□□ -0.08
SSBP4-204ENST00000597724 DNAL1Q4LDG9 190 aa14.53□□□□□ -0.08
SSBP4-204ENST00000597724 FAM205BPQ63HN1 556 aa14.53□□□□□ -0.08
SSBP4-204ENST00000597724 ZNF544Q6NX49 715 aa14.53□□□□□ -0.08
SSBP4-204ENST00000597724 PRSS57Q6UWY2 283 aa14.53□□□□□ -0.08
SSBP4-204ENST00000597724 ZER1Q7Z7L7 766 aa14.53□□□□□ -0.08
SSBP4-204ENST00000597724 FBXL14Q8N1E6 418 aa14.53□□□□□ -0.08
SSBP4-204ENST00000597724 FGFBP3Q8TAT2 258 aa14.53□□□□□ -0.08
SSBP4-204ENST00000597724 FNDC8Q8TC99 324 aa14.53□□□□□ -0.08
SSBP4-204ENST00000597724 NANOS1Q8WY41 292 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms