RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 DAP3P51398 398 aaKnown RBP9.7□□□□□ -0.86
VRK3-210ENST00000596121 ZNF133P52736 654 aaPredicted RBP9.7□□□□□ -0.86
VRK3-210ENST00000596121 HMGA2P52926 109 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 CLRN1P58418 232 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 UBE2NP61088 152 aaKnown RBP9.7□□□□□ -0.86
VRK3-210ENST00000596121 RPL27P61353 136 aaKnown RBP9.7□□□□□ -0.86
VRK3-210ENST00000596121 PIGFQ07326 219 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 TOP3AQ13472 1001 aaPredicted RBP9.7□□□□□ -0.86
VRK3-210ENST00000596121 ZBED5Q49AG3 693 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 KLHL17Q6TDP4 642 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 ZNF813Q6ZN06 617 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 C20orf204Q6ZNR8 217 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 SSX8Q7RTT4 187 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 MDP1Q86V88 176 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 ADGRG5Q8IZF4 528 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 PIAS4Q8N2W9 510 aaPredicted RBP9.7□□□□□ -0.86
VRK3-210ENST00000596121 NOXO1Q8NFA2 376 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 SMAP2Q8WU79 429 aaPredicted RBP9.7□□□□□ -0.86
VRK3-210ENST00000596121 MCUR1Q96AQ8 359 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 ASB9Q96DX5 294 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 MS4A3Q96HJ5 214 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 SLC38A2Q96QD8 506 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 ALPK1Q96QP1 1244 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 FOXB1Q99853 325 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 MUC13Q9H3R2 512 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 OBP2BQ9NPH6 170 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 B3GAT2Q9NPZ5 323 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 CISD1Q9NZ45 108 aaKnown RBP9.7□□□□□ -0.86
VRK3-210ENST00000596121 IL20RAQ9UHF4 553 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 POFUT2Q9Y2G5 429 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 ADAM18Q9Y3Q7 739 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 LYVE1Q9Y5Y7 322 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 RTTNQ86VV8 2226 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 UNC119BA6NIH7 251 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 IGKV3-15P01624 115 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 SCG5P05408 212 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 CDAP32320 146 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 ACVR1BP36896 505 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 CDH11P55287 796 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 NAAAQ02083 359 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 DBPQ10586 325 aaPredicted RBP9.69□□□□□ -0.86
VRK3-210ENST00000596121 TRAP1Q12931 704 aaKnown RBP9.69□□□□□ -0.86
VRK3-210ENST00000596121 ANKDD1AQ495B1 522 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 MESTQ5EB52 335 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 MTX3Q5HYI7 312 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 C1QTNF12Q5T7M4 302 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 ZNF770Q6IQ21 691 aaPredicted RBP9.69□□□□□ -0.86
VRK3-210ENST00000596121 SLC25A47Q6Q0C1 308 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 SLC22A25Q6T423 547 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 SPNS3Q6ZMD2 512 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 RRM2BQ7LG56 351 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 FAM122BQ7Z309 247 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 CDK20Q8IZL9 346 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 SLC22A24Q8N4F4 322 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 FAM169BQ8N8A8 192 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 RSRC1Q96IZ7 334 aaKnown RBP9.69□□□□□ -0.86
VRK3-210ENST00000596121 Q96M85 177 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 CCL19Q99731 98 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 SH3GL3Q99963 347 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 KATNB1Q9BVA0 655 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 MAGIXQ9H6Y5 334 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 TMEM38BQ9NVV0 291 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 BEX4Q9NWD9 120 aaPredicted RBP9.69□□□□□ -0.86
VRK3-210ENST00000596121 MOKQ9UQ07 419 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 LAMP3Q9UQV4 416 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 TMEM5Q9Y2B1 443 aa9.69□□□□□ -0.86
VRK3-210ENST00000596121 MAGED1Q9Y5V3 778 aaPredicted RBP9.69□□□□□ -0.86
VRK3-210ENST00000596121 CENPBD1B2RD01 187 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 H7C1C5 153 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 OVOL3O00110 214 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 DNAJC8O75937 253 aaPredicted RBP9.68□□□□□ -0.86
VRK3-210ENST00000596121 CD14P08571 375 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 HOXC12P31275 282 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 GSSP48637 474 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 IDH3GP51553 393 aaPredicted RBP9.68□□□□□ -0.86
VRK3-210ENST00000596121 SMIM11AP58511 58 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 LCN6P62502 163 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 ADAM8P78325 824 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 HGFACQ04756 655 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 TAF11Q15544 211 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 ETFDHQ16134 617 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 DNAL1Q4LDG9 190 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 C10orf128Q5T292 105 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 C1orf94Q6P1W5 598 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 PGBD2Q6P3X8 592 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 ZNF584Q8IVC4 421 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 ARIH2OSQ8N7S6 290 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 WFDC11Q8NEX6 87 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 OR9Q2Q8NGE9 314 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 CANT1Q8WVQ1 401 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 NSMAFQ92636 917 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 FBXW5Q969U6 566 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 NABP1Q96AH0 204 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 RASD2Q96D21 266 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 RADILQ96JH8 1075 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 DHRS9Q9BPW9 319 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 TRAF4Q9BUZ4 470 aaPredicted RBP9.68□□□□□ -0.86
VRK3-210ENST00000596121 NRIP3Q9NQ35 241 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 SLC7A8Q9UHI5 535 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 MGAT4BQ9UQ53 548 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms