RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 OR6X1Q8NH79 312 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 ADAD1Q96M93 576 aaKnown RBP11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 TEAD3Q99594 435 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 EMC6Q9BV81 110 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 HCAR1Q9BXC0 346 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 MRPS26Q9BYN8 205 aaKnown RBP11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 RPRD1BQ9NQG5 326 aaKnown RBP11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 ASB6Q9NWX5 421 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 TNFRSF10DQ9UBN6 386 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 MOKQ9UQ07 419 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 MTORP42345 2549 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 PCNX1Q96RV3 2341 aa11.63□□□□□ -0.55
SHKBP1-209ENST00000595803 SLC35F4A4IF30 521 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 TRIM64A6NGJ6 449 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 H7C1C5 153 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 TRAF3IP2O43734 574 aaPredicted RBP11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 AKAP8O43823 692 aaKnown RBP11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 CDK1P06493 297 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 STSP08842 583 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 CLUP10909 449 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 PIPP12273 146 aaPredicted RBP11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 SLC15A1P46059 708 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 CLRN1P58418 232 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 LCN6P62502 163 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 TUBA4AP68366 448 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 SLC35A2P78381 396 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 ST3GAL4Q11206 333 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 C3AR1Q16581 482 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 SLC35D3Q5M8T2 416 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 P4HA3Q7Z4N8 544 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 MCEMP1Q8IX19 187 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 CISD2Q8N5K1 135 aaKnown RBP11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 ZPLD1Q8TCW7 415 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 SLC25A44Q96H78 314 aaPredicted RBP11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 TMEM80Q96HE8 168 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 GPR137Q96N19 417 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 ALG12Q9BV10 488 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 NMNAT2Q9BZQ4 307 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 RERGLQ9H628 205 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 PLSCR2Q9NRY7 297 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 MRPS18AQ9NVS2 196 aaKnown RBP11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 FKBP14Q9NWM8 211 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 VSX1Q9NZR4 365 aaPredicted RBP11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 B9D1Q9UPM9 204 aa11.62□□□□□ -0.55
SHKBP1-209ENST00000595803 MED12Q93074 2177 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 SLC22A23A1A5C7 686 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 OR14I1A6ND48 311 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 GPR171O14626 319 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 SLC16A7O60669 478 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 WISP2O76076 250 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 GLCEO94923 617 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 FADS2O95864 444 aaKnown RBP11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 CLPTM1O96005 669 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 IGHG1P01857 330 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 GYPBP06028 91 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 SPI1P17947 270 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 SLC2A5P22732 501 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 CRABP1P29762 137 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 PYCR1P32322 319 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 CENPAP49450 140 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 RUNX1T1Q06455 604 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 RAB40BQ12829 278 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 CAMK2DQ13557 499 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 SF3B4Q15427 424 aaKnown RBP eCLIP11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 CARD17Q5XLA6 110 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 DNM1P34Q6PK57 102 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 SPARTQ8N0X7 666 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 OR6V1Q8N148 313 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 SVOPQ8N4V2 548 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 SYT14Q8NB59 555 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 PROKR2Q8NFJ6 384 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 OR51L1Q8NGJ5 315 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 FNDC8Q8TC99 324 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 SGCDQ92629 289 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 ZNF775Q96BV0 537 aaPredicted RBP11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 INTS12Q96CB8 462 aaKnown RBP11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 LGALS12Q96DT0 336 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 TUBA1CQ9BQE3 449 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 PRDM14Q9GZV8 571 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 SYT4Q9H2B2 425 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 VCX3AQ9NNX9 186 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 FGF20Q9NP95 211 aaPredicted RBP11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 PAK1IP1Q9NWT1 392 aaPredicted RBP11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 CHCHD3Q9NX63 227 aaKnown RBP11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 KLHL9Q9P2J3 617 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 PCDHGB1Q9Y5G3 927 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 FKBP7Q9Y680 259 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 AKAP9Q99996 3911 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 HIVEP3Q5T1R4 2406 aa11.61□□□□□ -0.55
SHKBP1-209ENST00000595803 CCDC182A6NF36 153 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 FAM171A2A8MVW0 826 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 AHRRA9YTQ3 701 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 CENPBD1B2RD01 187 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 KHDRBS3O75525 346 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 RAB36O95755 333 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 MT-ND2P03891 347 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 SMIM18P0DKX4 95 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 GSTT1P30711 240 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 BLVRAP53004 296 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 POU4F2Q12837 409 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms