RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 OR51A4Q8NGJ6 313 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 PNPLA2Q96AD5 504 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 CDCA3Q99618 268 aaPredicted RBP14.97□□□□□ -0.01
LIG1-206ENST00000594067 LPAR4Q99677 370 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 OPN4Q9UHM6 478 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 LAMP5Q9UJQ1 280 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 HS3ST3A1Q9Y663 406 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 TCRBV16S1A1N1A0A5B0 115 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 SIX6O95475 246 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 ANXA2P07355 339 aaKnown RBP14.97□□□□□ -0.01
LIG1-206ENST00000594067 IL32P24001 234 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 MST1P26927 711 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 H2BFSP57053 126 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 RPL18Q07020 188 aaKnown RBP14.97□□□□□ -0.01
LIG1-206ENST00000594067 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.97□□□□□ -0.01
LIG1-206ENST00000594067 MESTQ5EB52 335 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 DPY19L4Q7Z388 723 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 ZNF676Q8N7Q3 588 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 ZNF321PQ8N8H1 164 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 CCDC74AQ96AQ1 378 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 WDR76Q9H967 626 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 GRHPRQ9UBQ7 328 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 PFDN2Q9UHV9 154 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 MOKQ9UQ07 419 aa14.97□□□□□ -0.01
LIG1-206ENST00000594067 TRBV5-5A0A0J9YX44 114 aa14.96□□□□□ -0.01
LIG1-206ENST00000594067 TEX46H3BTG2 121 aa14.96□□□□□ -0.01
LIG1-206ENST00000594067 RP2O75695 350 aa14.96□□□□□ -0.01
LIG1-206ENST00000594067 AKR7A3O95154 331 aa14.96□□□□□ -0.01
LIG1-206ENST00000594067 CLPSP04118 112 aa14.96□□□□□ -0.01
LIG1-206ENST00000594067 GABRG2P18507 467 aa14.96□□□□□ -0.01
LIG1-206ENST00000594067 MAPK3P27361 379 aaPredicted RBP14.96□□□□□ -0.01
LIG1-206ENST00000594067 OC90Q02509 493 aaPredicted RBP14.96□□□□□ -0.01
LIG1-206ENST00000594067 CFAP77Q6ZQR2 320 aa14.96□□□□□ -0.01
LIG1-206ENST00000594067 SLC36A1Q7Z2H8 476 aa14.96□□□□□ -0.01
LIG1-206ENST00000594067 ZNF440Q8IYI8 595 aa14.96□□□□□ -0.01
LIG1-206ENST00000594067 ZSCAN1Q8NBB4 408 aa14.96□□□□□ -0.01
LIG1-206ENST00000594067 BVESQ8NE79 360 aa14.96□□□□□ -0.01
LIG1-206ENST00000594067 OR5M1Q8NGP8 315 aa14.96□□□□□ -0.01
LIG1-206ENST00000594067 ZDHHC1Q8WTX9 485 aa14.96□□□□□ -0.01
LIG1-206ENST00000594067 KTI12Q96EK9 354 aaPredicted RBP14.96□□□□□ -0.01
LIG1-206ENST00000594067 TSPAN32Q96QS1 320 aa14.96□□□□□ -0.01
LIG1-206ENST00000594067 MAP3K3Q99759 626 aa14.96□□□□□ -0.01
LIG1-206ENST00000594067 LDAHQ9H6V9 325 aa14.96□□□□□ -0.01
LIG1-206ENST00000594067 ZC4H2Q9NQZ6 224 aa14.96□□□□□ -0.01
LIG1-206ENST00000594067 TMEM184BQ9Y519 407 aaPredicted RBP14.96□□□□□ -0.01
LIG1-206ENST00000594067 ASAH2BP0C7U1 165 aa14.96□□□□□ -0.02
LIG1-206ENST00000594067 PNMTP11086 282 aa14.96□□□□□ -0.02
LIG1-206ENST00000594067 DLX5P56178 289 aa14.96□□□□□ -0.02
LIG1-206ENST00000594067 MAZP56270 477 aaKnown RBP14.96□□□□□ -0.02
LIG1-206ENST00000594067 SKP2Q13309 424 aa14.96□□□□□ -0.02
LIG1-206ENST00000594067 KCNAB1Q14722 419 aa14.96□□□□□ -0.02
LIG1-206ENST00000594067 MAMSTRQ6ZN01 415 aa14.96□□□□□ -0.02
LIG1-206ENST00000594067 LRRC69Q6ZNQ3 347 aa14.96□□□□□ -0.02
LIG1-206ENST00000594067 DNM1P46Q6ZS02 220 aa14.96□□□□□ -0.02
LIG1-206ENST00000594067 NAXDQ8IW45 347 aa14.96□□□□□ -0.02
LIG1-206ENST00000594067 FBXW5Q969U6 566 aa14.96□□□□□ -0.02
LIG1-206ENST00000594067 ARL6Q9H0F7 186 aa14.96□□□□□ -0.02
LIG1-206ENST00000594067 TTYH1Q9H313 450 aaPredicted RBP14.96□□□□□ -0.02
LIG1-206ENST00000594067 GLS2Q9UI32 602 aa14.96□□□□□ -0.02
LIG1-206ENST00000594067 PIAS3Q9Y6X2 628 aa14.96□□□□□ -0.02
LIG1-206ENST00000594067 COL4A2P08572 1712 aa14.96□□□□□ -0.02
LIG1-206ENST00000594067 NUPL2O15504 423 aaKnown RBP14.95□□□□□ -0.02
LIG1-206ENST00000594067 TMEM127O75204 238 aa14.95□□□□□ -0.02
LIG1-206ENST00000594067 IGHV4-34P06331 123 aa14.95□□□□□ -0.02
LIG1-206ENST00000594067 FCER2P06734 321 aa14.95□□□□□ -0.02
LIG1-206ENST00000594067 PPP3CBP16298 524 aa14.95□□□□□ -0.02
LIG1-206ENST00000594067 PPM1FP49593 454 aaPredicted RBP14.95□□□□□ -0.02
LIG1-206ENST00000594067 FNDC7Q5VTL7 733 aa14.95□□□□□ -0.02
LIG1-206ENST00000594067 POMZP3Q6PJE2 187 aa14.95□□□□□ -0.02
LIG1-206ENST00000594067 GLB1L2Q8IW92 636 aa14.95□□□□□ -0.02
LIG1-206ENST00000594067 OR2G2Q8NGZ5 317 aa14.95□□□□□ -0.02
LIG1-206ENST00000594067 NSMAFQ92636 917 aa14.95□□□□□ -0.02
LIG1-206ENST00000594067 TMEM106AQ96A25 262 aa14.95□□□□□ -0.02
LIG1-206ENST00000594067 MRI1Q9BV20 369 aa14.95□□□□□ -0.02
LIG1-206ENST00000594067 ETV7Q9Y603 341 aa14.95□□□□□ -0.02
LIG1-206ENST00000594067 MPDZO75970 2070 aa14.95□□□□□ -0.02
LIG1-206ENST00000594067 OR4C45A6NMZ5 311 aa14.95□□□□□ -0.02
LIG1-206ENST00000594067 GLSO94925 669 aaPredicted RBP14.95□□□□□ -0.02
LIG1-206ENST00000594067 THEGLP0DJG4 465 aa14.95□□□□□ -0.02
LIG1-206ENST00000594067 MNDAP41218 407 aa14.95□□□□□ -0.02
LIG1-206ENST00000594067 FZD2Q14332 565 aa14.95□□□□□ -0.02
LIG1-206ENST00000594067 ZMYND11Q15326 602 aa14.95□□□□□ -0.02
LIG1-206ENST00000594067 OR1S1Q8NH92 325 aa14.95□□□□□ -0.02
LIG1-206ENST00000594067 ZNF563Q8TA94 476 aa14.95□□□□□ -0.02
LIG1-206ENST00000594067 SYT4Q9H2B2 425 aa14.95□□□□□ -0.02
LIG1-206ENST00000594067 UBQLN4Q9NRR5 601 aa14.95□□□□□ -0.02
LIG1-206ENST00000594067 SLC6A5Q9Y345 797 aa14.95□□□□□ -0.02
LIG1-206ENST00000594067 LRP4O75096 1905 aa14.94□□□□□ -0.02
LIG1-206ENST00000594067 C17orf105B2RV13 164 aa14.94□□□□□ -0.02
LIG1-206ENST00000594067 PRAMEF26H0Y7S4 382 aa14.94□□□□□ -0.02
LIG1-206ENST00000594067 APEHP13798 732 aaKnown RBP14.94□□□□□ -0.02
LIG1-206ENST00000594067 DLX2Q07687 328 aaPredicted RBP14.94□□□□□ -0.02
LIG1-206ENST00000594067 PCGF3Q3KNV8 242 aa14.94□□□□□ -0.02
LIG1-206ENST00000594067 FOXN4Q96NZ1 517 aa14.94□□□□□ -0.02
LIG1-206ENST00000594067 AMELYQ99218 206 aa14.94□□□□□ -0.02
LIG1-206ENST00000594067 EXOSC3Q9NQT5 275 aaKnown RBP14.94□□□□□ -0.02
LIG1-206ENST00000594067 SLCO1B1Q9Y6L6 691 aa14.94□□□□□ -0.02
LIG1-206ENST00000594067 SPTY2D1-AS1A0A0U1RR47 76 aa14.94□□□□□ -0.02
LIG1-206ENST00000594067 SCDO00767 359 aa14.94□□□□□ -0.02
LIG1-206ENST00000594067 NSA2O95478 260 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms