RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 MOGAT1Q96PD6 335 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 EPYCQ99645 322 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 MCHR1Q99705 422 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 SH3GL1Q99961 368 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 TMEM27Q9HBJ8 222 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 HIF1ANQ9NWT6 349 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 MED29Q9NX70 200 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 B3GNT2Q9NY97 397 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 SLC13A4Q9UKG4 626 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 GRIP1Q9Y3R0 1128 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 CORINQ9Y5Q5 1042 aa12.67□□□□□ -0.38
PNKP-202ENST00000593706 MGAM2Q2M2H8 2515 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 A0A0A6YYJ9 748 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 ZNF726A6NNF4 738 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 RGS9O75916 674 aaPredicted RBP12.66□□□□□ -0.38
PNKP-202ENST00000593706 TFP02787 698 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 HPXP02790 462 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 HLA-DOBP13765 273 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 ZNF14P17017 642 aaPredicted RBP12.66□□□□□ -0.38
PNKP-202ENST00000593706 CFPP27918 469 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 GLRXP35754 106 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 GIPRP48546 466 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 PUDPQ08623 228 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 PMS2P3Q13401 168 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 MAD2L1BPQ15013 274 aaPredicted RBP12.66□□□□□ -0.38
PNKP-202ENST00000593706 MSMPQ1L6U9 139 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 ENTPD8Q5MY95 495 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 C8orf82Q6P1X6 216 aaPredicted RBP12.66□□□□□ -0.38
PNKP-202ENST00000593706 TREML1Q86YW5 311 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 WDFY1Q8IWB7 410 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 POU5F2Q8N7G0 328 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 OR51F2Q8NH61 342 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 ADAMTS16Q8TE57 1224 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 RDH5Q92781 318 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 RCN3Q96D15 328 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 LRR1Q96L50 414 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 FOXB1Q99853 325 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 MRPL39Q9NYK5 338 aaKnown RBP12.66□□□□□ -0.38
PNKP-202ENST00000593706 FZR1Q9UM11 496 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 MEGF8Q7Z7M0 2845 aa12.66□□□□□ -0.38
PNKP-202ENST00000593706 ARHGAP32A7KAX9 2087 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 FAM220BPB1ANY3 271 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 FAM157AC9JC47 383 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 LRRN3E7EW58 273 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 MS4A18H0YCH9 400 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 PPIHO43447 177 aaKnown RBP12.65□□□□□ -0.38
PNKP-202ENST00000593706 UBL3O95164 117 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 VENTXO95231 258 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 MSMBP08118 114 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 ZNF35P13682 527 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 AHCYP23526 432 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 CSNK1A1P48729 337 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 SEC24CP53992 1094 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 RAB1AP62820 205 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 NKPD1Q17RQ9 610 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 MS4A18Q3C1V0 323 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 MMEL1Q495T6 779 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 ERICH5Q6P6B1 374 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 THSD4Q6ZMP0 1018 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 CARM1Q86X55 608 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 PCYOX1LQ8NBM8 494 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 SEMA6DQ8NFY4 1073 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 VANGL1Q8TAA9 524 aaPredicted RBP12.65□□□□□ -0.38
PNKP-202ENST00000593706 ZNF418Q8TF45 676 aaPredicted RBP12.65□□□□□ -0.38
PNKP-202ENST00000593706 LRRC37BQ96QE4 947 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 ECSITQ9BQ95 431 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 PRSS27Q9BQR3 290 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 PLA2G12AQ9BZM1 189 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 MYLK2Q9H1R3 596 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 ZNF275Q9NSD4 429 aaPredicted RBP12.65□□□□□ -0.38
PNKP-202ENST00000593706 CMTM6Q9NX76 183 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 TREM2Q9NZC2 230 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 MYEF2Q9P2K5 600 aaKnown RBP12.65□□□□□ -0.38
PNKP-202ENST00000593706 GMPR2Q9P2T1 348 aaKnown RBP12.65□□□□□ -0.38
PNKP-202ENST00000593706 SLC7A8Q9UHI5 535 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 DUSP13Q9UII6 198 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 FBXL3Q9UKT7 428 aa12.65□□□□□ -0.38
PNKP-202ENST00000593706 ZNF346Q9UL40 294 aaKnown RBP12.65□□□□□ -0.38
PNKP-202ENST00000593706 TRAPPC13A5PLN9 417 aa12.64□□□□□ -0.39
PNKP-202ENST00000593706 CPSF4LA6NMK7 179 aaKnown RBP12.64□□□□□ -0.39
PNKP-202ENST00000593706 NAT2P11245 290 aa12.64□□□□□ -0.39
PNKP-202ENST00000593706 COL8A2P25067 703 aa12.64□□□□□ -0.39
PNKP-202ENST00000593706 RAB39AQ14964 217 aa12.64□□□□□ -0.39
PNKP-202ENST00000593706 DEF8Q6ZN54 512 aa12.64□□□□□ -0.39
PNKP-202ENST00000593706 ZNF627Q7L945 461 aa12.64□□□□□ -0.39
PNKP-202ENST00000593706 LRP11Q86VZ4 500 aa12.64□□□□□ -0.39
PNKP-202ENST00000593706 RP9Q8TA86 221 aaKnown RBP12.64□□□□□ -0.39
PNKP-202ENST00000593706 ZFAND2BQ8WV99 257 aa12.64□□□□□ -0.39
PNKP-202ENST00000593706 RASSF5Q8WWW0 418 aa12.64□□□□□ -0.39
PNKP-202ENST00000593706 TXNDC15Q96J42 360 aa12.64□□□□□ -0.39
PNKP-202ENST00000593706 ZNF75AQ96N20 296 aa12.64□□□□□ -0.39
PNKP-202ENST00000593706 ZNF416Q9BWM5 594 aa12.64□□□□□ -0.39
PNKP-202ENST00000593706 DENND2DQ9H6A0 471 aaPredicted RBP12.64□□□□□ -0.39
PNKP-202ENST00000593706 GID8Q9NWU2 228 aa12.64□□□□□ -0.39
PNKP-202ENST00000593706 ZNF224Q9NZL3 707 aa12.64□□□□□ -0.39
PNKP-202ENST00000593706 C11orf98E9PRG8 122 aa12.63□□□□□ -0.39
PNKP-202ENST00000593706 PLPP3O14495 311 aa12.63□□□□□ -0.39
PNKP-202ENST00000593706 NCR1O76036 304 aa12.63□□□□□ -0.39
PNKP-202ENST00000593706 OR6A2O95222 327 aa12.63□□□□□ -0.39
PNKP-202ENST00000593706 PNPP00491 289 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms