RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 DPP10Q8N608 796 aa20.49■□□□□ 0.87
LSM4-202ENST00000593564 SLC30A7Q8NEW0 376 aa20.49■□□□□ 0.87
LSM4-202ENST00000593564 OR4D11Q8NGI4 311 aa20.49■□□□□ 0.87
LSM4-202ENST00000593564 TMEM186Q96B77 213 aa20.49■□□□□ 0.87
LSM4-202ENST00000593564 ZNF426Q9BUY5 554 aa20.49■□□□□ 0.87
LSM4-202ENST00000593564 ZNF416Q9BWM5 594 aa20.49■□□□□ 0.87
LSM4-202ENST00000593564 NARFLQ9H6Q4 476 aa20.49■□□□□ 0.87
LSM4-202ENST00000593564 HIF1ANQ9NWT6 349 aa20.49■□□□□ 0.87
LSM4-202ENST00000593564 TRAPPC13A5PLN9 417 aa20.48■□□□□ 0.87
LSM4-202ENST00000593564 FAM157AC9JC47 383 aa20.48■□□□□ 0.87
LSM4-202ENST00000593564 RP2O75695 350 aa20.48■□□□□ 0.87
LSM4-202ENST00000593564 MSMBP08118 114 aa20.48■□□□□ 0.87
LSM4-202ENST00000593564 ASAH2BP0C7U1 165 aa20.48■□□□□ 0.87
LSM4-202ENST00000593564 PGA4P0DJD7 388 aa20.48■□□□□ 0.87
LSM4-202ENST00000593564 PGA3P0DJD8 388 aa20.48■□□□□ 0.87
LSM4-202ENST00000593564 MTPNP58546 118 aa20.48■□□□□ 0.87
LSM4-202ENST00000593564 SELPLGQ14242 412 aa20.48■□□□□ 0.87
LSM4-202ENST00000593564 MELKQ14680 651 aa20.48■□□□□ 0.87
LSM4-202ENST00000593564 RBM45Q8IUH3 476 aaKnown RBP20.48■□□□□ 0.87
LSM4-202ENST00000593564 SLC30A8Q8IWU4 369 aa20.48■□□□□ 0.87
LSM4-202ENST00000593564 PAQR4Q8N4S7 273 aaPredicted RBP20.48■□□□□ 0.87
LSM4-202ENST00000593564 LRRC17Q8N6Y2 441 aa20.48■□□□□ 0.87
LSM4-202ENST00000593564 STON2Q8WXE9 905 aa20.48■□□□□ 0.87
LSM4-202ENST00000593564 MPP4Q96JB8 637 aa20.48■□□□□ 0.87
LSM4-202ENST00000593564 CGREF1Q99674 301 aa20.48■□□□□ 0.87
LSM4-202ENST00000593564 SH3GL3Q99963 347 aa20.48■□□□□ 0.87
LSM4-202ENST00000593564 PCDHAC1Q9H158 963 aa20.48■□□□□ 0.87
LSM4-202ENST00000593564 C1orf198Q9H425 327 aa20.48■□□□□ 0.87
LSM4-202ENST00000593564 GPR160Q9UJ42 338 aa20.48■□□□□ 0.87
LSM4-202ENST00000593564 SLC7A7Q9UM01 511 aa20.48■□□□□ 0.87
LSM4-202ENST00000593564 NDUFAF1Q9Y375 327 aa20.48■□□□□ 0.87
LSM4-202ENST00000593564 A0A0A6YYJ9 748 aa20.47■□□□□ 0.87
LSM4-202ENST00000593564 WNT9BO14905 357 aa20.47■□□□□ 0.87
LSM4-202ENST00000593564 PPIHO43447 177 aaKnown RBP20.47■□□□□ 0.87
LSM4-202ENST00000593564 GAAP10253 952 aa20.47■□□□□ 0.87
LSM4-202ENST00000593564 CD247P20963 164 aa20.47■□□□□ 0.87
LSM4-202ENST00000593564 SELENOVP59797 346 aa20.47■□□□□ 0.87
LSM4-202ENST00000593564 NKPD1Q17RQ9 610 aa20.47■□□□□ 0.87
LSM4-202ENST00000593564 NRN1LQ496H8 165 aa20.47■□□□□ 0.87
LSM4-202ENST00000593564 TMEM53Q6P2H8 277 aa20.47■□□□□ 0.87
LSM4-202ENST00000593564 PATL1Q86TB9 770 aaKnown RBP20.47■□□□□ 0.87
LSM4-202ENST00000593564 TSPYL5Q86VY4 417 aaPredicted RBP20.47■□□□□ 0.87
LSM4-202ENST00000593564 VANGL1Q8TAA9 524 aaPredicted RBP20.47■□□□□ 0.87
LSM4-202ENST00000593564 METTL17Q9H7H0 456 aaPredicted RBP20.47■□□□□ 0.87
LSM4-202ENST00000593564 TREM2Q9NZC2 230 aa20.47■□□□□ 0.87
LSM4-202ENST00000593564 TAAR3PQ9P1P4 343 aa20.47■□□□□ 0.87
LSM4-202ENST00000593564 GRIP1Q9Y3R0 1128 aa20.47■□□□□ 0.87
LSM4-202ENST00000593564 IGLV3-9A0A075B6K5 115 aa20.46■□□□□ 0.87
LSM4-202ENST00000593564 KPNA4O00629 521 aaPredicted RBP20.46■□□□□ 0.87
LSM4-202ENST00000593564 SNAP29O95721 258 aa20.46■□□□□ 0.87
LSM4-202ENST00000593564 BCL10O95999 233 aa20.46■□□□□ 0.87
LSM4-202ENST00000593564 IGHG1P01857 330 aa20.46■□□□□ 0.87
LSM4-202ENST00000593564 HIST1H2ABP04908 130 aa20.46■□□□□ 0.87
LSM4-202ENST00000593564 QDPRP09417 244 aa20.46■□□□□ 0.87
LSM4-202ENST00000593564 FAM157BP0CG42 384 aa20.46■□□□□ 0.87
LSM4-202ENST00000593564 ZNF250P15622 560 aa20.46■□□□□ 0.87
LSM4-202ENST00000593564 MMEL1Q495T6 779 aa20.46■□□□□ 0.87
LSM4-202ENST00000593564 HIST3H2AQ7L7L0 130 aa20.46■□□□□ 0.87
LSM4-202ENST00000593564 RETREG3Q86VR2 466 aa20.46■□□□□ 0.87
LSM4-202ENST00000593564 OR4K5Q8NGD3 323 aa20.46■□□□□ 0.87
LSM4-202ENST00000593564 OR51F2Q8NH61 342 aa20.46■□□□□ 0.87
LSM4-202ENST00000593564 HIST1H2ACQ93077 130 aa20.46■□□□□ 0.87
LSM4-202ENST00000593564 TAMM41Q96BW9 452 aa20.46■□□□□ 0.87
LSM4-202ENST00000593564 KAT8Q9H7Z6 458 aaKnown RBP20.46■□□□□ 0.87
LSM4-202ENST00000593564 CDH20Q9HBT6 801 aa20.46■□□□□ 0.87
LSM4-202ENST00000593564 LPAR2Q9HBW0 351 aa20.46■□□□□ 0.87
LSM4-202ENST00000593564 HINT3Q9NQE9 182 aaKnown RBP20.46■□□□□ 0.87
LSM4-202ENST00000593564 C17orf100A8MU93 164 aa20.45■□□□□ 0.86
LSM4-202ENST00000593564 ANGPT2O15123 496 aa20.45■□□□□ 0.86
LSM4-202ENST00000593564 CLPTM1O96005 669 aa20.45■□□□□ 0.86
LSM4-202ENST00000593564 PTHP01270 115 aa20.45■□□□□ 0.86
LSM4-202ENST00000593564 PCGF2P35227 344 aa20.45■□□□□ 0.86
LSM4-202ENST00000593564 MAGEB1P43366 347 aa20.45■□□□□ 0.86
LSM4-202ENST00000593564 KLF3P57682 345 aaPredicted RBP20.45■□□□□ 0.86
LSM4-202ENST00000593564 LMO4P61968 165 aa20.45■□□□□ 0.86
LSM4-202ENST00000593564 HIST3H3Q16695 136 aa20.45■□□□□ 0.86
LSM4-202ENST00000593564 ALKBH6Q3KRA9 238 aa20.45■□□□□ 0.86
LSM4-202ENST00000593564 SLC36A2Q495M3 483 aa20.45■□□□□ 0.86
LSM4-202ENST00000593564 NANOGNBQ7Z5D8 188 aa20.45■□□□□ 0.86
LSM4-202ENST00000593564 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.45■□□□□ 0.86
LSM4-202ENST00000593564 SYNPRQ8TBG9 265 aa20.45■□□□□ 0.86
LSM4-202ENST00000593564 ZFAND2BQ8WV99 257 aa20.45■□□□□ 0.86
LSM4-202ENST00000593564 LRRC37BQ96QE4 947 aa20.45■□□□□ 0.86
LSM4-202ENST00000593564 OCEL1Q9H607 264 aa20.45■□□□□ 0.86
LSM4-202ENST00000593564 RNF121Q9H920 327 aa20.45■□□□□ 0.86
LSM4-202ENST00000593564 SLCO1C1Q9NYB5 712 aa20.45■□□□□ 0.86
LSM4-202ENST00000593564 TRIM33Q9UPN9 1127 aa20.45■□□□□ 0.86
LSM4-202ENST00000593564 VIMP08670 466 aaKnown RBP20.44■□□□□ 0.86
LSM4-202ENST00000593564 UMPSP11172 480 aa20.44■□□□□ 0.86
LSM4-202ENST00000593564 CCL2P13500 99 aa20.44■□□□□ 0.86
LSM4-202ENST00000593564 CLRN1P58418 232 aa20.44■□□□□ 0.86
LSM4-202ENST00000593564 SCGB2A2Q13296 93 aa20.44■□□□□ 0.86
LSM4-202ENST00000593564 TBC1D28Q2M2D7 210 aa20.44■□□□□ 0.86
LSM4-202ENST00000593564 PCGF3Q3KNV8 242 aa20.44■□□□□ 0.86
LSM4-202ENST00000593564 INTS11Q5TA45 600 aaKnown RBP20.44■□□□□ 0.86
LSM4-202ENST00000593564 SLC16A14Q7RTX9 510 aa20.44■□□□□ 0.86
LSM4-202ENST00000593564 SEMA6DQ8NFY4 1073 aa20.44■□□□□ 0.86
LSM4-202ENST00000593564 OR1J2Q8NGS2 313 aa20.44■□□□□ 0.86
LSM4-202ENST00000593564 ZNF519Q8TB69 540 aa20.44■□□□□ 0.86
LSM4-202ENST00000593564 TSPEARQ8WU66 669 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms