RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 IGLV3-9A0A075B6K5 115 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 LOC105371242A0A075B767 164 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 TRAV20A0A0B4J274 112 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 CPSF4LA6NMK7 179 aaKnown RBP13.96□□□□□ -0.17
LIG1-205ENST00000593425 C17orf100A8MU93 164 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 WIPF1O43516 503 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 OR6A2O95222 327 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 LYPD3O95274 346 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 CH25HO95992 272 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 PNPP00491 289 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 PGA4P0DJD7 388 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 PGA3P0DJD8 388 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 OR8G3PP0DMU2 310 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 IDH3AP50213 366 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 PCBP3P57721 371 aaKnown RBP13.96□□□□□ -0.17
LIG1-205ENST00000593425 CCL8P80075 99 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 MYBPC1Q00872 1141 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 MVKQ03426 396 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 RBBP4Q09028 425 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 ZP4Q12836 540 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 DUSP7Q16829 419 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 ENTPD8Q5MY95 495 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 FAHD2BQ6P2I3 314 aaPredicted RBP13.96□□□□□ -0.17
LIG1-205ENST00000593425 TSPYL5Q86VY4 417 aaPredicted RBP13.96□□□□□ -0.17
LIG1-205ENST00000593425 PTOV1Q86YD1 416 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 LRRC17Q8N6Y2 441 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 GPR32P1Q8NGA4 272 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 OR4D11Q8NGI4 311 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 OR6T1Q8NGN1 323 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 ZNF418Q8TF45 676 aaPredicted RBP13.96□□□□□ -0.17
LIG1-205ENST00000593425 GTF3AQ92664 365 aaKnown RBP13.96□□□□□ -0.17
LIG1-205ENST00000593425 ZNF566Q969W8 418 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 FAHD2AQ96GK7 314 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 ZNF665Q9H7R5 613 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 CDH20Q9HBT6 801 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 HINT3Q9NQE9 182 aaKnown RBP13.96□□□□□ -0.17
LIG1-205ENST00000593425 PCDHB10Q9UN67 800 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 CORO2BQ9UQ03 480 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 ANGPT4Q9Y264 503 aa13.96□□□□□ -0.17
LIG1-205ENST00000593425 KPNA4O00629 521 aaPredicted RBP13.95□□□□□ -0.18
LIG1-205ENST00000593425 DHHO43323 396 aa13.95□□□□□ -0.18
LIG1-205ENST00000593425 RNF13O43567 381 aa13.95□□□□□ -0.18
LIG1-205ENST00000593425 FMO6PO60774 539 aa13.95□□□□□ -0.18
LIG1-205ENST00000593425 DEAF1O75398 565 aaPredicted RBP13.95□□□□□ -0.18
LIG1-205ENST00000593425 LCKP06239 509 aa13.95□□□□□ -0.18
LIG1-205ENST00000593425 ZNF250P15622 560 aa13.95□□□□□ -0.18
LIG1-205ENST00000593425 EPHA1P21709 976 aa13.95□□□□□ -0.18
LIG1-205ENST00000593425 KLF3P57682 345 aaPredicted RBP13.95□□□□□ -0.18
LIG1-205ENST00000593425 HILS1P60008 231 aa13.95□□□□□ -0.18
LIG1-205ENST00000593425 DLEU7Q6UYE1 221 aa13.95□□□□□ -0.18
LIG1-205ENST00000593425 RBM45Q8IUH3 476 aaKnown RBP13.95□□□□□ -0.18
LIG1-205ENST00000593425 OR4K5Q8NGD3 323 aa13.95□□□□□ -0.18
LIG1-205ENST00000593425 SYNPRQ8TBG9 265 aa13.95□□□□□ -0.18
LIG1-205ENST00000593425 SLC25A44Q96H78 314 aaPredicted RBP13.95□□□□□ -0.18
LIG1-205ENST00000593425 C7orf26Q96N11 449 aa13.95□□□□□ -0.18
LIG1-205ENST00000593425 EVA1AQ9H8M9 152 aa13.95□□□□□ -0.18
LIG1-205ENST00000593425 RNF121Q9H920 327 aa13.95□□□□□ -0.18
LIG1-205ENST00000593425 TMBIM4Q9HC24 238 aa13.95□□□□□ -0.18
LIG1-205ENST00000593425 SLCO1B3Q9NPD5 702 aa13.95□□□□□ -0.18
LIG1-205ENST00000593425 SLC22A23A1A5C7 686 aa13.94□□□□□ -0.18
LIG1-205ENST00000593425 EVPLLA8MZ36 301 aa13.94□□□□□ -0.18
LIG1-205ENST00000593425 SPRY1O43609 319 aaPredicted RBP13.94□□□□□ -0.18
LIG1-205ENST00000593425 MPZL1O95297 269 aa13.94□□□□□ -0.18
LIG1-205ENST00000593425 FARS2O95363 451 aaKnown RBP13.94□□□□□ -0.18
LIG1-205ENST00000593425 SNAP29O95721 258 aa13.94□□□□□ -0.18
LIG1-205ENST00000593425 QDPRP09417 244 aa13.94□□□□□ -0.18
LIG1-205ENST00000593425 COMPP49747 757 aaPredicted RBP13.94□□□□□ -0.18
LIG1-205ENST00000593425 ARFIP2P53365 341 aa13.94□□□□□ -0.18
LIG1-205ENST00000593425 GLO1Q04760 184 aa13.94□□□□□ -0.18
LIG1-205ENST00000593425 SCGB2A2Q13296 93 aa13.94□□□□□ -0.18
LIG1-205ENST00000593425 SELPLGQ14242 412 aa13.94□□□□□ -0.18
LIG1-205ENST00000593425 AGKQ53H12 422 aa13.94□□□□□ -0.18
LIG1-205ENST00000593425 RUNDC3AQ59EK9 446 aa13.94□□□□□ -0.18
LIG1-205ENST00000593425 TMEM53Q6P2H8 277 aa13.94□□□□□ -0.18
LIG1-205ENST00000593425 TMEM154Q6P9G4 183 aa13.94□□□□□ -0.18
LIG1-205ENST00000593425 PEG10Q86TG7 708 aaKnown RBP13.94□□□□□ -0.18
LIG1-205ENST00000593425 VANGL1Q8TAA9 524 aaPredicted RBP13.94□□□□□ -0.18
LIG1-205ENST00000593425 ADAMTS16Q8TE57 1224 aa13.94□□□□□ -0.18
LIG1-205ENST00000593425 SNX33Q8WV41 574 aa13.94□□□□□ -0.18
LIG1-205ENST00000593425 CCDC28BQ9BUN5 200 aa13.94□□□□□ -0.18
LIG1-205ENST00000593425 TMPRSS13Q9BYE2 586 aa13.94□□□□□ -0.18
LIG1-205ENST00000593425 NANSQ9NR45 359 aa13.94□□□□□ -0.18
LIG1-205ENST00000593425 CACNG2Q9Y698 323 aa13.94□□□□□ -0.18
LIG1-205ENST00000593425 TMEM89A2RUT3 159 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 M0QX08 132 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 PLPP2O43688 288 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 TGDSO95455 350 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 ASAH2BP0C7U1 165 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 CRYBB2P43320 205 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 TBC1D28Q2M2D7 210 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 PCGF3Q3KNV8 242 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 SLC36A2Q495M3 483 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 ACSM5Q6NUN0 579 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 TTC33Q6PID6 262 aaPredicted RBP13.93□□□□□ -0.18
LIG1-205ENST00000593425 USP43Q70EL4 1123 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 SLC16A14Q7RTX9 510 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 C11orf65Q8NCR3 313 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 ICA1LQ8NDH6 482 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 ZNF519Q8TB69 540 aa13.93□□□□□ -0.18
LIG1-205ENST00000593425 FAM216AQ8WUB2 273 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms