RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 PRPS1P60891 318 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 RPL27P61353 136 aaKnown RBP8.5□□□□□ -1.05
DDX39A-220ENST00000593008 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.5□□□□□ -1.05
DDX39A-220ENST00000593008 NPRL3Q12980 569 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 RNPS1Q15287 305 aaKnown RBP8.5□□□□□ -1.05
DDX39A-220ENST00000593008 ETFDHQ16134 617 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 SNCBQ16143 134 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 TMEM201Q5SNT2 666 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 SLX4IPQ5VYV7 408 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 OR2A2Q6IF42 318 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 LEG1Q6P5S2 330 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 B3GLCTQ6Y288 498 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 FAM214BQ7L5A3 538 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 SLC43A2Q8N370 569 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 LNX2Q8N448 690 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 ARIH2OSQ8N7S6 290 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 ZNF610Q8N9Z0 462 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 SLC37A3Q8NCC5 494 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 OR2T33Q8NG76 320 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 OR52E2Q8NGJ4 325 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 OR51L1Q8NGJ5 315 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 CYGBQ8WWM9 190 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 NSMAFQ92636 917 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 RNASE6Q93091 150 aaKnown RBP8.5□□□□□ -1.05
DDX39A-220ENST00000593008 TMEM45BQ96B21 275 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 NMD3Q96D46 503 aaKnown RBP8.5□□□□□ -1.05
DDX39A-220ENST00000593008 LURAP1Q96LR2 239 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 ZFP3Q96NJ6 502 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 SF3B5Q9BWJ5 86 aaKnown RBP8.5□□□□□ -1.05
DDX39A-220ENST00000593008 SFXN3Q9BWM7 321 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 GRIP2Q9C0E4 1043 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 SYT4Q9H2B2 425 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 ZNF226Q9NYT6 803 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 TVP23BQ9NYZ1 205 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 CRIM1Q9NZV1 1036 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 PCDHGB5Q9Y5G0 923 aa8.5□□□□□ -1.05
DDX39A-220ENST00000593008 MYO9AB2RTY4 2548 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 CREBBPQ92793 2442 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 LOC102725191A0A1B0GVB3 256 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 SLC22A23A1A5C7 686 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 SH3D21A4FU49 640 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 SURF4O15260 269 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 VAMP5O95183 116 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 TXNDC12O95881 172 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 IL18BPO95998 194 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 SCG5P05408 212 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 ACADSP16219 412 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 SDHAP31040 664 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 CCKARP32238 428 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 PYCR1P32322 319 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 OR3A2P47893 321 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 GIPRP48546 466 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 CSNK1A1P48729 337 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 DAP3P51398 398 aaKnown RBP8.49□□□□□ -1.05
DDX39A-220ENST00000593008 ADARB1P78563 741 aaKnown RBP8.49□□□□□ -1.05
DDX39A-220ENST00000593008 CDK5Q00535 292 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 COX10Q12887 443 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 PDK3Q15120 406 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 C12orf73Q69YU5 71 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 SLC27A4Q6P1M0 643 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 LRFN4Q6PJG9 635 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 ZNF474Q6S9Z5 364 aaPredicted RBP8.49□□□□□ -1.05
DDX39A-220ENST00000593008 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.49□□□□□ -1.05
DDX39A-220ENST00000593008 TMEM200AQ86VY9 491 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 C20orf196Q8IYI0 205 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 PACRGLQ8N7B6 248 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 NPEPL1Q8NDH3 523 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 OR6K3Q8NGY3 331 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 LINC01560Q8TB33 94 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 FAM81AQ8TBF8 368 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 SMAP2Q8WU79 429 aaPredicted RBP8.49□□□□□ -1.05
DDX39A-220ENST00000593008 APH1BQ8WW43 257 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 TMEM54Q969K7 222 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 APH1AQ96BI3 265 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 C14orf79Q96F83 325 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 IL4I1Q96RQ9 567 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 KCNK17Q96T54 332 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 DDOQ99489 341 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 PITX2Q99697 317 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 ADI1Q9BV57 179 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 RBM24Q9BX46 236 aaKnown RBP8.49□□□□□ -1.05
DDX39A-220ENST00000593008 MRPL13Q9BYD1 178 aaKnown RBP8.49□□□□□ -1.05
DDX39A-220ENST00000593008 RERGLQ9H628 205 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 HINT3Q9NQE9 182 aaKnown RBP8.49□□□□□ -1.05
DDX39A-220ENST00000593008 RPRD1BQ9NQG5 326 aaKnown RBP8.49□□□□□ -1.05
DDX39A-220ENST00000593008 GLRX2Q9NS18 164 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 FAM118AQ9NWS6 357 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 GALNT8Q9NY28 637 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 JKAMPQ9P055 326 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 EMC3Q9P0I2 261 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 GRHPRQ9UBQ7 328 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 FOXD3Q9UJU5 478 aaPredicted RBP8.49□□□□□ -1.05
DDX39A-220ENST00000593008 EMC9Q9Y3B6 208 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 UGT2A1Q9Y4X1 527 aa8.49□□□□□ -1.05
DDX39A-220ENST00000593008 HCFC1P51610 2035 aa8.48□□□□□ -1.05
DDX39A-220ENST00000593008 PRSS37A4D1T9 235 aa8.48□□□□□ -1.05
DDX39A-220ENST00000593008 ZNF503-AS2A6NEH8 195 aa8.48□□□□□ -1.05
DDX39A-220ENST00000593008 TUBAL3A6NHL2 446 aa8.48□□□□□ -1.05
DDX39A-220ENST00000593008 ARPC3O15145 178 aa8.48□□□□□ -1.05
DDX39A-220ENST00000593008 SLC43A1O75387 559 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms