RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-217ENST00000592905 ZNF469Q96JG9 3925 aaPredicted RBP13.19□□□□□ -0.3
ERCC1-217ENST00000592905 F8P00451 2351 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 UNC119BA6NIH7 251 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 E7EQL1 145 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 ATP6V1G2-DDX39BF2Z307 99 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 OR10H3O60404 316 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 SLC2A10O95528 541 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 SOD3P08294 240 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 HOXB1P14653 301 aaPredicted RBP13.19□□□□□ -0.3
ERCC1-217ENST00000592905 ERFP50548 548 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 RPL27P61353 136 aaKnown RBP13.19□□□□□ -0.3
ERCC1-217ENST00000592905 CHRNB3Q05901 458 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 BNIP1Q12981 228 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 HIST3H3Q16695 136 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 PGM2L1Q6PCE3 622 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 PIWIL3Q7Z3Z3 882 aaKnown RBP13.19□□□□□ -0.3
ERCC1-217ENST00000592905 SKA3Q8IX90 412 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 FGFBP3Q8TAT2 258 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 SMAP2Q8WU79 429 aaPredicted RBP13.19□□□□□ -0.3
ERCC1-217ENST00000592905 NSMAFQ92636 917 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 RSRC1Q96IZ7 334 aaKnown RBP13.19□□□□□ -0.3
ERCC1-217ENST00000592905 SLC38A2Q96QD8 506 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 FOXC2Q99958 501 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 SH3GL3Q99963 347 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 OBP2BQ9NPH6 170 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 TMCC3Q9ULS5 477 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 MGAT4BQ9UQ53 548 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 SIGLEC7Q9Y286 467 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 ADAM18Q9Y3Q7 739 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 MED13LQ71F56 2210 aa13.19□□□□□ -0.3
ERCC1-217ENST00000592905 FLNAP21333 2647 aaKnown RBP13.18□□□□□ -0.3
ERCC1-217ENST00000592905 IGKV1D-43A0A0B4J1Z2 117 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 H7C1C5 153 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 GSC2O15499 205 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 ARHGEF9O43307 516 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 DNAJC8O75937 253 aaPredicted RBP13.18□□□□□ -0.3
ERCC1-217ENST00000592905 STAMBPO95630 424 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 IGHMP01871 453 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 CECR9P0C854 216 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 CBR1P16152 277 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 IDH3GP51553 393 aaPredicted RBP13.18□□□□□ -0.3
ERCC1-217ENST00000592905 FXYD6P3P58550 94 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 LCN6P62502 163 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 CD47Q08722 323 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 TRAP1Q12931 704 aaKnown RBP13.18□□□□□ -0.3
ERCC1-217ENST00000592905 NPRL3Q12980 569 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 ANKDD1AQ495B1 522 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 FAM98BQ52LJ0 330 aaKnown RBP13.18□□□□□ -0.3
ERCC1-217ENST00000592905 THSD4Q6ZMP0 1018 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 DEPDC4Q8N2C3 294 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 SLC22A24Q8N4F4 322 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 ZNF519Q8TB69 540 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 PIGTQ969N2 578 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 GTPBP3Q969Y2 492 aaKnown RBP13.18□□□□□ -0.3
ERCC1-217ENST00000592905 Q96M85 177 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 KCNK17Q96T54 332 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 CADM1Q9BY67 442 aaKnown RBP13.18□□□□□ -0.3
ERCC1-217ENST00000592905 MAGIXQ9H6Y5 334 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 TMEM38BQ9NVV0 291 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 BEX4Q9NWD9 120 aaPredicted RBP13.18□□□□□ -0.3
ERCC1-217ENST00000592905 VNN3Q9NY84 501 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 B3GNT2Q9NY97 397 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 ZNF224Q9NZL3 707 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 ACANP16112 2415 aa13.18□□□□□ -0.3
ERCC1-217ENST00000592905 NPIPB13A6NJU9 1138 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 NPIPB4C9JG80 1138 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 TNFRSF11BO00300 401 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 SMPD2O60906 423 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 DANCRP0C864 163 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 CALCRP30988 508 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 CDAP32320 146 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 MAGEA2P43356 314 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 PTDSS1P48651 473 aaKnown RBP13.17□□□□□ -0.3
ERCC1-217ENST00000592905 TAF11Q15544 211 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 PGGHGQ32M88 737 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 ZNF627Q7L945 461 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 HDDC2Q7Z4H3 204 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 LURAP1LQ8IV03 231 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 ADGRG5Q8IZF4 528 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 OR9Q2Q8NGE9 314 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 TMEM171Q8WVE6 324 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 IGFBPL1Q8WX77 278 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 RASD2Q96D21 266 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 NMD3Q96D46 503 aaKnown RBP13.17□□□□□ -0.3
ERCC1-217ENST00000592905 PERPQ96FX8 193 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 CXXC4Q9H2H0 198 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 KRCC1Q9NPI7 259 aaPredicted RBP13.17□□□□□ -0.3
ERCC1-217ENST00000592905 CRNNQ9UBG3 495 aaPredicted RBP13.17□□□□□ -0.3
ERCC1-217ENST00000592905 GRHPRQ9UBQ7 328 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 IER3IP1Q9Y5U9 82 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 LYVE1Q9Y5Y7 322 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 U3KQV3 271 aa13.17□□□□□ -0.3
ERCC1-217ENST00000592905 TEX13CA0A0J9YWL9 993 aa13.16□□□□□ -0.3
ERCC1-217ENST00000592905 CENPBD1B2RD01 187 aa13.16□□□□□ -0.3
ERCC1-217ENST00000592905 IMPA2O14732 288 aa13.16□□□□□ -0.3
ERCC1-217ENST00000592905 KRT36O76013 467 aa13.16□□□□□ -0.3
ERCC1-217ENST00000592905 NDUFB2O95178 105 aa13.16□□□□□ -0.3
ERCC1-217ENST00000592905 IGKV3-15P01624 115 aa13.16□□□□□ -0.3
ERCC1-217ENST00000592905 IGLV1-44P01699 117 aa13.16□□□□□ -0.3
ERCC1-217ENST00000592905 CD8AP01732 235 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms